Literature DB >> 24630103

Single-molecule studies of actin assembly and disassembly factors.

Benjamin A Smith1, Jeff Gelles2, Bruce L Goode3.   

Abstract

The actin cytoskeleton is very dynamic and highly regulated by multiple associated proteins in vivo. Understanding how this system of proteins functions in the processes of actin network assembly and disassembly requires methods to dissect the mechanisms of activity of individual factors and of multiple factors acting in concert. The advent of single-filament and single-molecule fluorescence imaging methods has provided a powerful new approach to discovering actin-regulatory activities and obtaining direct, quantitative insights into the pathways of molecular interactions that regulate actin network architecture and dynamics. Here we describe techniques for acquisition and analysis of single-molecule data, applied to the novel challenges of studying the filament assembly and disassembly activities of actin-associated proteins in vitro. We discuss the advantages of single-molecule analysis in directly visualizing the order of molecular events, measuring the kinetic rates of filament binding and dissociation, and studying the coordination among multiple factors. The methods described here complement traditional biochemical approaches in elucidating actin-regulatory mechanisms in reconstituted filamentous networks.
© 2014 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Arp2/3 complex; Binding kinetics; Cofilin; Filament nucleation; Formin; Polymerization; Severing; Total internal reflection fluorescence

Mesh:

Substances:

Year:  2014        PMID: 24630103      PMCID: PMC4037564          DOI: 10.1016/B978-0-12-397924-7.00006-6

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  41 in total

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Journal:  Methods Enzymol       Date:  2003       Impact factor: 1.600

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Authors:  Jeffrey R Kuhn; Thomas D Pollard
Journal:  Biophys J       Date:  2004-11-19       Impact factor: 4.033

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Authors:  David R Kovar; Elizabeth S Harris; Rachel Mahaffy; Henry N Higgs; Thomas D Pollard
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Authors:  T Yanagida; M Nakase; K Nishiyama; F Oosawa
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5.  Pathway of actin filament branch formation by Arp2/3 complex revealed by single-molecule imaging.

Authors:  Benjamin A Smith; Karen Daugherty-Clarke; Bruce L Goode; Jeff Gelles
Journal:  Proc Natl Acad Sci U S A       Date:  2013-01-04       Impact factor: 11.205

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Authors:  L Blanchoin; T D Pollard; R D Mullins
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Authors:  T Q Uyeda; S J Kron; J A Spudich
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9.  Flexibility of actin filaments derived from thermal fluctuations. Effect of bound nucleotide, phalloidin, and muscle regulatory proteins.

Authors:  H Isambert; P Venier; A C Maggs; A Fattoum; R Kassab; D Pantaloni; M F Carlier
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4.  Single-molecule imaging of a three-component ordered actin disassembly mechanism.

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Review 5.  Single-molecule fluorescence microscopy review: shedding new light on old problems.

Authors:  Sviatlana Shashkova; Mark C Leake
Journal:  Biosci Rep       Date:  2017-07-21       Impact factor: 3.840

6.  Reconstitution of contractile actomyosin rings in vesicles.

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7.  Single-molecule imaging of IQGAP1 regulating actin filament dynamics.

Authors:  Gregory J Hoeprich; Amy N Sinclair; Shashank Shekhar; Bruce L Goode
Journal:  Mol Biol Cell       Date:  2021-11-03       Impact factor: 4.138

8.  Abp1 promotes Arp2/3 complex-dependent actin nucleation and stabilizes branch junctions by antagonizing GMF.

Authors:  Siyang Guo; Olga S Sokolova; Johnson Chung; Shae Padrick; Jeff Gelles; Bruce L Goode
Journal:  Nat Commun       Date:  2018-07-24       Impact factor: 14.919

  8 in total

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