Literature DB >> 2462924

The use of dwell time cross-correlation functions to study single-ion channel gating kinetics.

F G Ball1, C J Kerry, R L Ramsey, M S Sansom, P N Usherwood.   

Abstract

The derivation of cross-correlation functions from single-channel dwell (open and closed) times is described. Simulation of single-channel data for simple gating models, alongside theoretical treatment, is used to demonstrate the relationship of cross-correlation functions to underlying gating mechanisms. It is shown that time irreversibility of gating kinetics may be revealed in cross-correlation functions. Application of cross-correlation function analysis to data derived from the locust muscle glutamate receptor-channel provides evidence for multiple gateway states and time reversibility of gating. A model for the gating of this channel is used to show the effect of omission of brief channel events on cross-correlation functions.

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Year:  1988        PMID: 2462924      PMCID: PMC1330298          DOI: 10.1016/S0006-3495(88)82961-8

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  14 in total

1.  ON THE NATURE OF ALLOSTERIC TRANSITIONS: A PLAUSIBLE MODEL.

Authors:  J MONOD; J WYMAN; J P CHANGEUX
Journal:  J Mol Biol       Date:  1965-05       Impact factor: 5.469

2.  A note on correlations in single ion channel records.

Authors:  D Colquhoun; A G Hawkes
Journal:  Proc R Soc Lond B Biol Sci       Date:  1987-02-23

3.  Single channel kinetics of a glutamate receptor.

Authors:  C J Kerry; K S Kits; R L Ramsey; M S Sansom; P N Usherwood
Journal:  Biophys J       Date:  1987-01       Impact factor: 4.033

4.  Kinetic analysis of channel gating. Application to the cholinergic receptor channel and the chloride channel from Torpedo californica.

Authors:  P Labarca; J A Rice; D R Fredkin; M Montal
Journal:  Biophys J       Date:  1985-04       Impact factor: 4.033

5.  Single-channel autocorrelation functions: the effects of time interval omission.

Authors:  F G Ball; M S Sansom
Journal:  Biophys J       Date:  1988-05       Impact factor: 4.033

6.  Relationship between statistical properties of single ionic channel recordings and the thermodynamic state of the channels.

Authors:  I Z Steinberg
Journal:  J Theor Biol       Date:  1987-01-07       Impact factor: 2.691

7.  Frequencies of paired open-closed durations of ion channels. Method of evaluation from single-channel recordings.

Authors:  I Z Steinberg
Journal:  Biophys J       Date:  1987-07       Impact factor: 4.033

8.  Non-random openings and concentration-dependent lifetimes of glutamate-gated channels in muscle membrane.

Authors:  K A Gration; J J Lambert; R Ramsey; P N Usherwood
Journal:  Nature       Date:  1981-06-04       Impact factor: 49.962

9.  Relationship between membrane excitability and single channel open-close kinetics.

Authors:  J R Clay; L J DeFelice
Journal:  Biophys J       Date:  1983-05       Impact factor: 4.033

10.  Statistical properties of single sodium channels.

Authors:  R Horn; C A Vandenberg
Journal:  J Gen Physiol       Date:  1984-10       Impact factor: 4.086

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  10 in total

1.  Glutamate receptor-channel gating. Maximum likelihood analysis of gigaohm seal recordings from locust muscle.

Authors:  S E Bates; M S Sansom; F G Ball; R L Ramsey; P N Usherwood
Journal:  Biophys J       Date:  1990-07       Impact factor: 4.033

2.  Estimating kinetic parameters for single channels with simulation. A general method that resolves the missed event problem and accounts for noise.

Authors:  K L Magleby; D S Weiss
Journal:  Biophys J       Date:  1990-12       Impact factor: 4.033

Review 3.  Calcium-activated potassium channels: regulation by calcium.

Authors:  O B McManus
Journal:  J Bioenerg Biomembr       Date:  1991-08       Impact factor: 2.945

4.  Single ion channel models incorporating aggregation and time interval omission.

Authors:  F G Ball; G F Yeo; R K Milne; R O Edeson; B W Madsen; M S Sansom
Journal:  Biophys J       Date:  1993-02       Impact factor: 4.033

5.  Two-dimensional components and hidden dependencies provide insight into ion channel gating mechanisms.

Authors:  B S Rothberg; R A Bello; K L Magleby
Journal:  Biophys J       Date:  1997-06       Impact factor: 4.033

6.  Kinetic time constants independent of previous single-channel activity suggest Markov gating for a large conductance Ca-activated K channel.

Authors:  O B McManus; K L Magleby
Journal:  J Gen Physiol       Date:  1989-12       Impact factor: 4.086

7.  Markov, fractal, diffusion, and related models of ion channel gating. A comparison with experimental data from two ion channels.

Authors:  M S Sansom; F G Ball; C J Kerry; R McGee; R L Ramsey; P N Usherwood
Journal:  Biophys J       Date:  1989-12       Impact factor: 4.033

8.  Adjacent interval analysis distinguishes among gating mechanisms for the fast chloride channel from rat skeletal muscle.

Authors:  A L Blatz; K L Magleby
Journal:  J Physiol       Date:  1989-03       Impact factor: 5.182

9.  Testing for microscopic reversibility in the gating of maxi K+ channels using two-dimensional dwell-time distributions.

Authors:  L Song; K L Magleby
Journal:  Biophys J       Date:  1994-07       Impact factor: 4.033

10.  High-speed AFM reveals accelerated binding of agitoxin-2 to a K+ channel by induced fit.

Authors:  A Sumino; T Sumikama; T Uchihashi; S Oiki
Journal:  Sci Adv       Date:  2019-07-03       Impact factor: 14.136

  10 in total

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