Literature DB >> 24624545

The Cancer Genome Atlas: clinical applications for breast cancer.

Cynthia X Ma, Matthew J Ellis.   

Abstract

Advances in next-generation sequencing technologies in recent years have allowed in-depth study of somatic mutations in over 1,000 breast cancer samples.The Cancer Genome Atlas (TCGA) is the largest single genome-characterization effort to date. It is remarkable for the integration of DNA sequencing with genome-wide profiling of the epigenome, microRNAome, transcriptome, and proteome for more than 500 diverse primary untreated breast cancers. This article aims to provide an overview ofTCGA findings, with a particular focus on their potential biological relevance and therapeutic implications.

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Year:  2013        PMID: 24624545

Source DB:  PubMed          Journal:  Oncology (Williston Park)        ISSN: 0890-9091            Impact factor:   2.990


  25 in total

Review 1.  Precision Medicine in Low- and Middle-Income Countries.

Authors:  Jerald P Radich; Edward Briercheck; Daniel T Chiu; Manoj P Menon; Olga Sala Torra; Cecilia C S Yeung; Edus H Warren
Journal:  Annu Rev Pathol       Date:  2022-01-24       Impact factor: 32.350

2.  Acinic cell carcinoma of breast: morphologic and immunohistochemical review of a rare breast cancer subtype.

Authors:  Niamh Conlon; Navid Sadri; Adriana D Corben; Lee K Tan
Journal:  Hum Pathol       Date:  2016-01-07       Impact factor: 3.466

Review 3.  Optimal management of hormone receptor positive metastatic breast cancer in 2016.

Authors:  Tomas Reinert; Carlos H Barrios
Journal:  Ther Adv Med Oncol       Date:  2015-11       Impact factor: 8.168

4.  Increased angiogenesis is associated with a 32-gene expression signature and 6p21 amplification in aggressive endometrial cancer.

Authors:  Ingunn M Stefansson; Maria Raeder; Elisabeth Wik; Monica Mannelqvist; Kanthida Kusonmano; Gøril Knutsvik; Ingfrid Haldorsen; Jone Trovik; Anne M Øyan; Karl-H Kalland; Anne Cathrine Staff; Helga B Salvesen; Lars A Akslen
Journal:  Oncotarget       Date:  2015-04-30

5.  Only one health, and so many omics.

Authors:  Nives Pećina-Šlaus; Marko Pećina
Journal:  Cancer Cell Int       Date:  2015-06-23       Impact factor: 5.722

6.  The role of the aryl hydrocarbon receptor in the development of cells with the molecular and functional characteristics of cancer stem-like cells.

Authors:  Elizabeth A Stanford; Zhongyan Wang; Olga Novikov; Francesca Mulas; Esther Landesman-Bollag; Stefano Monti; Brenden W Smith; David C Seldin; George J Murphy; David H Sherr
Journal:  BMC Biol       Date:  2016-03-16       Impact factor: 7.431

7.  microRNA-206 impairs c-Myc-driven cancer in a synthetic lethal manner by directly inhibiting MAP3K13.

Authors:  Han Han; Yuxing Chen; Li Cheng; Edward V Prochownik; Youjun Li
Journal:  Oncotarget       Date:  2016-03-29

8.  PI(3,4)P2 plays critical roles in the regulation of focal adhesion dynamics of MDA-MB-231 breast cancer cells.

Authors:  Miki Fukumoto; Takeshi Ijuin; Tadaomi Takenawa
Journal:  Cancer Sci       Date:  2017-05-11       Impact factor: 6.716

Review 9.  Revealing the Complexity of Breast Cancer by Next Generation Sequencing.

Authors:  John Verigos; Angeliki Magklara
Journal:  Cancers (Basel)       Date:  2015-11-06       Impact factor: 6.639

Review 10.  Future paradigms for precision oncology.

Authors:  Giannoula Lakka Klement; Knarik Arkun; Dalibor Valik; Tina Roffidal; Ali Hashemi; Christos Klement; Paolo Carmassi; Edward Rietman; Ondrej Slaby; Pavel Mazanek; Peter Mudry; Gabor Kovacs; Csongor Kiss; Koen Norga; Dobrin Konstantinov; Nicolas André; Irene Slavc; Henk van Den Berg; Alexandra Kolenova; Leos Kren; Jiri Tuma; Jarmila Skotakova; Jaroslav Sterba
Journal:  Oncotarget       Date:  2016-07-19
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