Literature DB >> 24620725

An Alba-domain protein contributes to the stage-regulated stability of amastin transcripts in Leishmania.

Aurélien Dupé1, Carole Dumas, Barbara Papadopoulou.   

Abstract

Leishmania infantum promastigotes differentiate into amastigote forms within the phagolysosome of mammalian macrophages causing visceral leishmaniasis. Delta-amastins belong to a multigenic surface protein family of potential virulence factors that are specifically expressed in the amastigote life cycle stage through distinct regulatory elements in the 3' UTR controlling either mRNA stability or translation. Here, we provide novel insights on trans-acting factors regulating amastin developmental gene expression. Using RNA affinity chromatography with a 300 nt regulatory region within the amastin 3' UTR as bait, we identified an Alba-domain protein of 25 kDa (LiAlba20) as a specific amastin mRNA-binding partner. Genomic depletion of LiAlba20 results in amastin mRNA destabilization specifically in amastigotes, supporting a role of LiAlba20 in amastin gene regulation. As shown by comparative DNA microarray analysis, several delta-amastin transcripts but also other known developmentally regulated transcripts were downregulated in LiAlba20-/- knockout parasites. Inactivation of the second Alba-domain gene, LiAlba13, does not seem to affect amastin mRNA stability in either life stage of the parasite. These data indicate an important role of Alba-domain proteins in the regulation of Leishmania differentially expressed transcripts and open a new field of investigation for better understanding mechanisms contributing to post-transcriptional control in these parasites.
© 2013 John Wiley & Sons Ltd.

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Year:  2013        PMID: 24620725     DOI: 10.1111/mmi.12478

Source DB:  PubMed          Journal:  Mol Microbiol        ISSN: 0950-382X            Impact factor:   3.501


  20 in total

1.  ALBA4 modulates its stage-specific interactions and specific mRNA fates during Plasmodium yoelii growth and transmission.

Authors:  Elyse E Muñoz; Kevin J Hart; Michael P Walker; Mark F Kennedy; Mackenzie M Shipley; Scott E Lindner
Journal:  Mol Microbiol       Date:  2017-08-29       Impact factor: 3.501

Review 2.  Plasticity of the Leishmania genome leading to gene copy number variations and drug resistance.

Authors:  Marie-Claude N Laffitte; Philippe Leprohon; Barbara Papadopoulou; Marc Ouellette
Journal:  F1000Res       Date:  2016-09-20

Review 3.  Translational regulation in blood stages of the malaria parasite Plasmodium spp.: systems-wide studies pave the way.

Authors:  Shruthi Sridhar Vembar; Dorothea Droll; Artur Scherf
Journal:  Wiley Interdiscip Rev RNA       Date:  2016-05-26       Impact factor: 9.957

4.  RNA secondary structure and nucleotide composition of the conserved hallmark sequence of Leishmania SIDER2 retroposons are essential for endonucleolytic cleavage and mRNA degradation.

Authors:  Hiva Azizi; Tatiany P Romão; Karen Santos Charret; Prasad K Padmanabhan; Osvaldo P de Melo Neto; Michaela Müller-McNicoll; Barbara Papadopoulou
Journal:  PLoS One       Date:  2017-07-13       Impact factor: 3.240

5.  The Pumilio-domain protein PUF6 contributes to SIDER2 retroposon-mediated mRNA decay in Leishmania.

Authors:  Hiva Azizi; Carole Dumas; Barbara Papadopoulou
Journal:  RNA       Date:  2017-09-06       Impact factor: 4.942

6.  The PfAlba1 RNA-binding protein is an important regulator of translational timing in Plasmodium falciparum blood stages.

Authors:  Shruthi Sridhar Vembar; Cameron Ross Macpherson; Odile Sismeiro; Jean-Yves Coppée; Artur Scherf
Journal:  Genome Biol       Date:  2015-09-28       Impact factor: 13.583

7.  Differential Subcellular Localization of Leishmania Alba-Domain Proteins throughout the Parasite Development.

Authors:  Aurélien Dupé; Carole Dumas; Barbara Papadopoulou
Journal:  PLoS One       Date:  2015-09-03       Impact factor: 3.240

8.  A bioinformatic survey of RNA-binding proteins in Plasmodium.

Authors:  B P Niranjan Reddy; Sony Shrestha; Kevin J Hart; Xiaoying Liang; Karen Kemirembe; Liwang Cui; Scott E Lindner
Journal:  BMC Genomics       Date:  2015-11-02       Impact factor: 3.969

9.  Disclosing 3' UTR cis-elements and putative partners involved in gene expression regulation in Leishmania spp.

Authors:  Monica Cristina Terrão; Elton José Rosas de Vasconcelos; Tânia Aquino Defina; Peter J Myler; Angela Kaysel Cruz
Journal:  PLoS One       Date:  2017-08-31       Impact factor: 3.240

10.  RNA-seq transcriptional profiling of Leishmania amazonensis reveals an arginase-dependent gene expression regulation.

Authors:  Juliana Ide Aoki; Sandra Marcia Muxel; Ricardo Andrade Zampieri; Maria Fernanda Laranjeira-Silva; Karl Erik Müller; Audun Helge Nerland; Lucile Maria Floeter-Winter
Journal:  PLoS Negl Trop Dis       Date:  2017-10-27
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