Literature DB >> 24616516

Determinants of pore folding in potassium channel biogenesis.

Erin Delaney1, Pooja Khanna, LiWei Tu, John M Robinson, Carol Deutsch.   

Abstract

Many ion channels, both selective and nonselective, have reentrant pore loops that contribute to the architecture of the permeation pathway. It is a fundamental feature of these diverse channels, regardless of whether they are gated by changes of membrane potential or by neurotransmitters, and is critical to function of the channel. Misfolding of the pore loop leads to loss of trafficking and expression of these channels on the cell surface. Mature tetrameric potassium channels contain an α-helix within the pore loop. We systematically mutated the "pore helix" residues of the channel Kv1.3 and assessed the ability of the monomer to fold into a tertiary reentrant loop. Our results show that pore loop residues form a canonical α-helix in the monomer early in biogenesis and that disruption of tertiary folding is caused by hydrophilic substitutions only along one face of this α-helix. These results provide insight into the determinants of the reentrant pore conformation, which is essential for ion channel function.

Entities:  

Keywords:  accessibility assay; cysteine scan; formation of Kv pore; glutamate scan

Mesh:

Substances:

Year:  2014        PMID: 24616516      PMCID: PMC3970532          DOI: 10.1073/pnas.1324274111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  20 in total

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Authors:  L Tu; J Wang; A Helm; W R Skach; C Deutsch
Journal:  Biochemistry       Date:  2000-02-01       Impact factor: 3.162

2.  Energetics of pore opening in a voltage-gated K(+) channel.

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Journal:  Nat Struct Biol       Date:  1996-10

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Journal:  J Biol Chem       Date:  1996-08-02       Impact factor: 5.157

5.  Protonation state of E71 in KcsA and its role for channel collapse and inactivation.

Authors:  Manasi P Bhate; Ann E McDermott
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-31       Impact factor: 11.205

6.  Hydrophobicity scales and computational techniques for detecting amphipathic structures in proteins.

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7.  Pegylation: a method for assessing topological accessibilities in Kv1.3.

Authors:  J Lu; C Deutsch
Journal:  Biochemistry       Date:  2001-11-06       Impact factor: 3.162

8.  Truncated K+ channel DNA sequences specifically suppress lymphocyte K+ channel gene expression.

Authors:  L Tu; V Santarelli; C Deutsch
Journal:  Biophys J       Date:  1995-01       Impact factor: 4.033

9.  Gating currents from a nonconducting mutant reveal open-closed conformations in Shaker K+ channels.

Authors:  E Perozo; R MacKinnon; F Bezanilla; E Stefani
Journal:  Neuron       Date:  1993-08       Impact factor: 17.173

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Authors:  Q Lü; C Miller
Journal:  Science       Date:  1995-04-14       Impact factor: 47.728

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  7 in total

1.  Proteomic analysis of monolayer-integrated proteins on lipid droplets identifies amphipathic interfacial α-helical membrane anchors.

Authors:  Camille I Pataki; João Rodrigues; Lichao Zhang; Junyang Qian; Bradley Efron; Trevor Hastie; Joshua E Elias; Michael Levitt; Ron R Kopito
Journal:  Proc Natl Acad Sci U S A       Date:  2018-08-13       Impact factor: 11.205

2.  A Shared Mechanism for the Folding of Voltage-Gated K+ Channels.

Authors:  Sarah K McDonald; Talya S Levitz; Francis I Valiyaveetil
Journal:  Biochemistry       Date:  2019-03-07       Impact factor: 3.162

3.  Folding and misfolding of potassium channel monomers during assembly and tetramerization.

Authors:  Kevin C Song; Andrew V Molina; Ruofan Chen; Isabelle A Gagnon; Young Hoon Koh; Benoît Roux; Tobin R Sosnick
Journal:  Proc Natl Acad Sci U S A       Date:  2021-08-24       Impact factor: 11.205

4.  Quaternary structure independent folding of voltage-gated ion channel pore domain subunits.

Authors:  Cristina Arrigoni; Marco Lolicato; David Shaya; Ahmed Rohaim; Felix Findeisen; Lam-Kiu Fong; Claire M Colleran; Pawel Dominik; Sangwoo S Kim; Jonathan P Schuermann; William F DeGrado; Michael Grabe; Anthony A Kossiakoff; Daniel L Minor
Journal:  Nat Struct Mol Biol       Date:  2022-06-02       Impact factor: 18.361

5.  Determinants of trafficking, conduction, and disease within a K+ channel revealed through multiparametric deep mutational scanning.

Authors:  Willow Coyote-Maestas; David Nedrud; Yungui He; Daniel Schmidt
Journal:  Elife       Date:  2022-05-31       Impact factor: 8.713

Review 6.  Asparaginase treatment side-effects may be due to genes with homopolymeric Asn codons (Review-Hypothesis).

Authors:  Julian Banerji
Journal:  Int J Mol Med       Date:  2015-07-15       Impact factor: 4.101

7.  Mitochondrial Ultrastructure and Glucose Signaling Pathways Attributed to the Kv1.3 Ion Channel.

Authors:  Christopher P Kovach; Dolly Al Koborssy; Zhenbo Huang; Brandon M Chelette; James M Fadool; Debra A Fadool
Journal:  Front Physiol       Date:  2016-05-19       Impact factor: 4.566

  7 in total

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