Literature DB >> 24613343

Oct-1 regulates IL-17 expression by directing interchromosomal associations in conjunction with CTCF in T cells.

Lark Kyun Kim1, Enric Esplugues2, Cornelia E Zorca3, Fabio Parisi4, Yuval Kluger4, Tae Hoon Kim5, Niels J Galjart6, Richard A Flavell7.   

Abstract

Interchromosomal associations can regulate gene expression, but little is known about the molecular basis of such associations. In response to antigen stimulation, naive T cells can differentiate into Th1, Th2, and Th17 cells expressing IFN-γ, IL-4, and IL-17, respectively. We previously reported that in naive T cells, the IFN-γ locus is associated with the Th2 cytokine locus. Here we show that the Th2 locus additionally associates with the IL-17 locus. This association requires a DNase I hypersensitive region (RHS6) at the Th2 locus. RHS6 and the IL-17 promoter both bear Oct-1 binding sites. Deletion of either of these sites or Oct-1 gene impairs the association. Oct-1 and CTCF bind their cognate sites cooperatively, and CTCF deficiency similarly impairs the association. Finally, defects in the association lead to enhanced IL-17 induction. Collectively, our data indicate Th17 lineage differentiation is restrained by the Th2 locus via interchromosomal associations organized by Oct-1 and CTCF.
Copyright © 2014 Elsevier Inc. All rights reserved.

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Year:  2014        PMID: 24613343      PMCID: PMC4058095          DOI: 10.1016/j.molcel.2014.02.004

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  48 in total

1.  Silencing mediator for retinoid and thyroid hormone receptors interacts with octamer transcription factor-1 and acts as a transcriptional repressor.

Authors:  T Kakizawa; T Miyamoto; K Ichikawa; T Takeda; S Suzuki; J Mori ; M Kumagai; K Yamashita; K Hashizume
Journal:  J Biol Chem       Date:  2000-12-27       Impact factor: 5.157

2.  Th2-specific chromatin remodeling and enhancer activity in the Th2 cytokine locus control region.

Authors:  Patrick E Fields; Gap Ryol Lee; Sean T Kim; Victor V Bartsevich; Richard A Flavell
Journal:  Immunity       Date:  2004-12       Impact factor: 31.745

3.  GATA-3 suppresses Th1 development by downregulation of Stat4 and not through effects on IL-12Rbeta2 chain or T-bet.

Authors:  Takashi Usui; Ryuta Nishikomori; Atsushi Kitani; Warren Strober
Journal:  Immunity       Date:  2003-03       Impact factor: 31.745

Review 4.  IL-17 and Th17 Cells.

Authors:  Thomas Korn; Estelle Bettelli; Mohamed Oukka; Vijay K Kuchroo
Journal:  Annu Rev Immunol       Date:  2009       Impact factor: 28.527

5.  Purification and characterization of OTF-1, a transcription factor regulating cell cycle expression of a human histone H2b gene.

Authors:  C Fletcher; N Heintz; R G Roeder
Journal:  Cell       Date:  1987-12-04       Impact factor: 41.582

6.  Interchromosomal associations between alternatively expressed loci.

Authors:  Charalampos G Spilianakis; Maria D Lalioti; Terrence Town; Gap Ryol Lee; Richard A Flavell
Journal:  Nature       Date:  2005-05-08       Impact factor: 49.962

7.  Cohesin mediates transcriptional insulation by CCCTC-binding factor.

Authors:  Kerstin S Wendt; Keisuke Yoshida; Takehiko Itoh; Masashige Bando; Birgit Koch; Erika Schirghuber; Shuichi Tsutsumi; Genta Nagae; Ko Ishihara; Tsuyoshi Mishiro; Kazuhide Yahata; Fumio Imamoto; Hiroyuki Aburatani; Mitsuyoshi Nakao; Naoko Imamoto; Kazuhiro Maeshima; Katsuhiko Shirahige; Jan-Michael Peters
Journal:  Nature       Date:  2008-01-30       Impact factor: 49.962

8.  Critical role for the transcription regulator CCCTC-binding factor in the control of Th2 cytokine expression.

Authors:  Claudia Ribeiro de Almeida; Helen Heath; Sanja Krpic; Gemma M Dingjan; Jan Piet van Hamburg; Ingrid Bergen; Suzanne van de Nobelen; Frank Sleutels; Frank Grosveld; Niels Galjart; Rudi W Hendriks
Journal:  J Immunol       Date:  2009-01-15       Impact factor: 5.422

9.  Dynamic regulatory network controlling TH17 cell differentiation.

Authors:  Nir Yosef; Alex K Shalek; Jellert T Gaublomme; Hulin Jin; Youjin Lee; Amit Awasthi; Chuan Wu; Katarzyna Karwacz; Sheng Xiao; Marsela Jorgolli; David Gennert; Rahul Satija; Arvind Shakya; Diana Y Lu; John J Trombetta; Meenu R Pillai; Peter J Ratcliffe; Mathew L Coleman; Mark Bix; Dean Tantin; Hongkun Park; Vijay K Kuchroo; Aviv Regev
Journal:  Nature       Date:  2013-03-06       Impact factor: 49.962

10.  The pluripotency factor Oct4 interacts with Ctcf and also controls X-chromosome pairing and counting.

Authors:  Mary E Donohoe; Susana S Silva; Stefan F Pinter; Na Xu; Jeannie T Lee
Journal:  Nature       Date:  2009-06-17       Impact factor: 49.962

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  26 in total

Review 1.  The Oct1 transcription factor and epithelial malignancies: Old protein learns new tricks.

Authors:  Karina Vázquez-Arreguín; Dean Tantin
Journal:  Biochim Biophys Acta       Date:  2016-02-10

Review 2.  Transcriptional and epigenetic networks of helper T and innate lymphoid cells.

Authors:  Han-Yu Shih; Giuseppe Sciumè; Amanda C Poholek; Golnaz Vahedi; Kiyoshi Hirahara; Alejandro V Villarino; Michael Bonelli; Remy Bosselut; Yuka Kanno; Stefan A Muljo; John J O'Shea
Journal:  Immunol Rev       Date:  2014-09       Impact factor: 12.988

Review 3.  A potential role for genome structure in the translation of mechanical force during immune cell development.

Authors:  Elsie Jacobson; Jo K Perry; David S Long; Mark H Vickers; Justin M O'Sullivan
Journal:  Nucleus       Date:  2016-09-27       Impact factor: 4.197

Review 4.  Developing in 3D: the role of CTCF in cell differentiation.

Authors:  Rodrigo G Arzate-Mejía; Félix Recillas-Targa; Victor G Corces
Journal:  Development       Date:  2018-03-22       Impact factor: 6.868

5.  Myosin VI regulates gene pairing and transcriptional pause release in T cells.

Authors:  Cornelia E Zorca; Lark Kyun Kim; Yoon Jung Kim; Matthew R Krause; Daniel Zenklusen; Charalampos G Spilianakis; Richard A Flavell
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-13       Impact factor: 11.205

Review 6.  3D Genome Organization as an Epigenetic Determinant of Transcription Regulation in T Cells.

Authors:  George Papadogkonas; Dionysios-Alexandros Papamatheakis; Charalampos Spilianakis
Journal:  Front Immunol       Date:  2022-06-22       Impact factor: 8.786

Review 7.  Pairing and anti-pairing: a balancing act in the diploid genome.

Authors:  Eric F Joyce; Jelena Erceg; C-Ting Wu
Journal:  Curr Opin Genet Dev       Date:  2016-04-09       Impact factor: 5.578

8.  Pak1 mediates the stimulatory effect of insulin and curcumin on hepatic ChREBP expression.

Authors:  Kejing Zeng; Lili Tian; Adam Sirek; Weijuan Shao; Ling Liu; Yu-Ting Chiang; Jonathan Chernoff; Dominic S Ng; Jianping Weng; Tianru Jin
Journal:  J Mol Cell Biol       Date:  2017-10-01       Impact factor: 6.216

9.  Long-Range Transcriptional Control of the Il2 Gene by an Intergenic Enhancer.

Authors:  Parul Mehra; Andrew D Wells
Journal:  Mol Cell Biol       Date:  2015-09-08       Impact factor: 4.272

10.  Chromosomes distribute randomly to, but not within, human neutrophil nuclear lobes.

Authors:  Christine R Keenan; Michael J Mlodzianoski; Hannah D Coughlan; Naiara G Bediaga; Gaetano Naselli; Erin C Lucas; Qike Wang; Carolyn A de Graaf; Douglas J Hilton; Leonard C Harrison; Gordon K Smyth; Kelly L Rogers; Thomas Boudier; Rhys S Allan; Timothy M Johanson
Journal:  iScience       Date:  2021-02-07
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