Literature DB >> 24606924

Cell growth and size homeostasis in silico.

Yucheng Hu1, Tianqi Zhu2.   

Abstract

Cell growth in size is a complex process coordinated by intrinsic and environmental signals. In a research work performed by a different group, size distributions of an exponentially growing population of mammalian cells were used to infer cell-growth rate in size. The results suggested that cell growth was neither linear nor exponential, but subject to size-dependent regulation. To explain the observed growth pattern, we built a mathematical model in which growth rate was regulated by the relative amount of mRNA and ribosomes in a cell. Under the growth model and a stochastic division rule, we simulated the evolution of a population of cells. Both the sampled growth rate and size distribution from this in silico population agreed well with experimental data. To explore the model space, alternative growth models and division rules were studied. This work may serve as a starting point to understand the mechanisms behind cell growth and size regulation using predictive models.
Copyright © 2014 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2014        PMID: 24606924      PMCID: PMC4026780          DOI: 10.1016/j.bpj.2014.01.038

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  16 in total

1.  A coordinated global control over cellular transcription.

Authors:  Jacob Zhurinsky; Klaus Leonhard; Stephen Watt; Samuel Marguerat; Jürg Bähler; Paul Nurse
Journal:  Curr Biol       Date:  2010-10-21       Impact factor: 10.834

Review 2.  Coordinating genome expression with cell size.

Authors:  Samuel Marguerat; Jürg Bähler
Journal:  Trends Genet       Date:  2012-08-02       Impact factor: 11.639

3.  Cell growth and division. IV. Determination of volume growth rate and division probability.

Authors:  E C Anderson; G I Bell; D F Petersen; R A Tobey
Journal:  Biophys J       Date:  1969-02       Impact factor: 4.033

4.  A quantitative cytochemical investigation of the relationship between cell mass and initiation of DNA synthesis in mouse fibroblasts in vitro.

Authors:  D Killander; A Zetterberg
Journal:  Exp Cell Res       Date:  1965-10       Impact factor: 3.905

5.  Cell size, cell cycle and transition probability in mouse fibroblasts.

Authors:  R Shields; R F Brooks; P N Riddle; D F Capellaro; D Delia
Journal:  Cell       Date:  1978-10       Impact factor: 41.582

6.  Optical measurement of cycle-dependent cell growth.

Authors:  Mustafa Mir; Zhuo Wang; Zhen Shen; Michael Bednarz; Rashid Bashir; Ido Golding; Supriya G Prasanth; Gabriel Popescu
Journal:  Proc Natl Acad Sci U S A       Date:  2011-07-25       Impact factor: 11.205

7.  Dynamics extracted from fixed cells reveal feedback linking cell growth to cell cycle.

Authors:  Ran Kafri; Jason Levy; Miriam B Ginzberg; Seungeun Oh; Galit Lahav; Marc W Kirschner
Journal:  Nature       Date:  2013-02-28       Impact factor: 49.962

Review 8.  The regulation of cell size.

Authors:  Alison C Lloyd
Journal:  Cell       Date:  2013-09-12       Impact factor: 41.582

9.  The size control of fission yeast revisited.

Authors:  A Sveiczer; B Novak; J M Mitchison
Journal:  J Cell Sci       Date:  1996-12       Impact factor: 5.285

10.  Differences in the way a mammalian cell and yeast cells coordinate cell growth and cell-cycle progression.

Authors:  Ian Conlon; Martin Raff
Journal:  J Biol       Date:  2003-04-24
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  1 in total

Review 1.  Variation in transcriptome size: are we getting the message?

Authors:  Jeremy E Coate; Jeff J Doyle
Journal:  Chromosoma       Date:  2014-11-26       Impact factor: 4.316

  1 in total

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