Literature DB >> 24602868

Computational neuroscience: beyond the local circuit.

Haim Sompolinsky1.   

Abstract

Computational neuroscience has focused largely on the dynamics and function of local circuits of neuronal populations dedicated to a common task, such as processing a common sensory input, storing its features in working memory, choosing between a set of options dictated by controlled experimental settings or generating the appropriate actions. Most of current circuit models suggest mechanisms for computations that can be captured by networks of simplified neurons connected via simple synaptic weights. In this article I review the progress of this approach and its limitations. It is argued that new experimental techniques will yield data that might challenge the present paradigms in that they will (1) demonstrate the computational importance of microscopic structural and physiological complexity and specificity; (2) highlight the importance of models of large brain structures engaged in a variety of tasks; and (3) reveal the necessity of coupling the neuronal networks to chemical and environmental variables.
Copyright © 2014 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2014        PMID: 24602868     DOI: 10.1016/j.conb.2014.02.002

Source DB:  PubMed          Journal:  Curr Opin Neurobiol        ISSN: 0959-4388            Impact factor:   6.627


  19 in total

1.  The effects of neuron morphology on graph theoretic measures of network connectivity: the analysis of a two-level statistical model.

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2.  Fast volumetric calcium imaging across multiple cortical layers using sculpted light.

Authors:  Robert Prevedel; Aart J Verhoef; Alejandro J Pernía-Andrade; Siegfried Weisenburger; Ben S Huang; Tobias Nöbauer; Alma Fernández; Jeroen E Delcour; Peyman Golshani; Andrius Baltuska; Alipasha Vaziri
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3.  From Whole-Brain Data to Functional Circuit Models: The Zebrafish Optomotor Response.

Authors:  Eva A Naumann; James E Fitzgerald; Timothy W Dunn; Jason Rihel; Haim Sompolinsky; Florian Engert
Journal:  Cell       Date:  2016-11-03       Impact factor: 41.582

4.  Volumetric Ca2+ Imaging in the Mouse Brain Using Hybrid Multiplexed Sculpted Light Microscopy.

Authors:  Siegfried Weisenburger; Frank Tejera; Jeffrey Demas; Brandon Chen; Jason Manley; Fraser T Sparks; Francisca Martínez Traub; Tanya Daigle; Hongkui Zeng; Attila Losonczy; Alipasha Vaziri
Journal:  Cell       Date:  2019-04-11       Impact factor: 41.582

Review 5.  Personalizing neuromodulation.

Authors:  John D Medaglia; Brian Erickson; Jared Zimmerman; Apoorva Kelkar
Journal:  Int J Psychophysiol       Date:  2019-01-24       Impact factor: 2.997

Review 6.  Genetic variants in Alzheimer disease - molecular and brain network approaches.

Authors:  Chris Gaiteri; Sara Mostafavi; Christopher J Honey; Philip L De Jager; David A Bennett
Journal:  Nat Rev Neurol       Date:  2016-06-10       Impact factor: 42.937

Review 7.  A new neuroinformatics approach to personalized medicine in neurology: The Virtual Brain.

Authors:  Maria I Falcon; Viktor Jirsa; Ana Solodkin
Journal:  Curr Opin Neurol       Date:  2016-08       Impact factor: 5.710

Review 8.  Embedded ensemble encoding hypothesis: The role of the "Prepared" cell.

Authors:  Srdjan D Antic; Michael Hines; William W Lytton
Journal:  J Neurosci Res       Date:  2018-04-06       Impact factor: 4.164

9.  Analysis of complex neural circuits with nonlinear multidimensional hidden state models.

Authors:  Alexander Friedman; Alanna F Slocum; Danil Tyulmankov; Leif G Gibb; Alex Altshuler; Suthee Ruangwises; Qinru Shi; Sebastian E Toro Arana; Dirk W Beck; Jacquelyn E C Sholes; Ann M Graybiel
Journal:  Proc Natl Acad Sci U S A       Date:  2016-05-24       Impact factor: 11.205

10.  Simple, biologically-constrained CA1 pyramidal cell models using an intact, whole hippocampus context.

Authors:  Katie A Ferguson; Carey Y L Huh; Benedicte Amilhon; Sylvain Williams; Frances K Skinner
Journal:  F1000Res       Date:  2014-05-09
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