Literature DB >> 24598746

New insights into the catalytic active-site structure of multicopper oxidases.

Hirofumi Komori1, Ryosuke Sugiyama2, Kunishige Kataoka2, Kentaro Miyazaki3, Yoshiki Higuchi4, Takeshi Sakurai2.   

Abstract

Structural models determined by X-ray crystallography play a central role in understanding the catalytic mechanism of enzymes. However, X-ray radiation generates hydrated electrons that can cause significant damage to the active sites of metalloenzymes. In the present study, crystal structures of the multicopper oxidases (MCOs) CueO from Escherichia coli and laccase from a metagenome were determined. Diffraction data were obtained from a single crystal under low to high X-ray dose conditions. At low levels of X-ray exposure, unambiguous electron density for an O atom was observed inside the trinuclear copper centre (TNC) in both MCOs. The gradual reduction of copper by hydrated electrons monitored by measurement of the Cu K-edge X-ray absorption spectra led to the disappearance of the electron density for the O atom. In addition, the size of the copper triangle was enlarged by a two-step shift in the location of the type III coppers owing to reduction. Further, binding of O2 to the TNC after its full reduction was observed in the case of the laccase. Based on these novel structural findings, the diverse resting structures of the MCOs and their four-electron O2-reduction process are discussed.

Entities:  

Keywords:  X-ray absorption spectroscopy; bioinorganic chemistry; enzyme catalysis; metalloproteins

Mesh:

Substances:

Year:  2014        PMID: 24598746     DOI: 10.1107/S1399004713033051

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  8 in total

Review 1.  Three-dimensional structures of laccases.

Authors:  N Hakulinen; J Rouvinen
Journal:  Cell Mol Life Sci       Date:  2015-01-14       Impact factor: 9.261

2.  Exogenous acetate ion reaches the type II copper centre in CueO through the water-excretion channel and potentially affects the enzymatic activity.

Authors:  Hirofumi Komori; Kunishige Kataoka; Sakiko Tanaka; Nana Matsuda; Yoshiki Higuchi; Takeshi Sakurai
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2016-06-22       Impact factor: 1.056

3.  Biochemical, spectroscopic and X-ray structural analysis of deuterated multicopper oxidase CueO prepared from a new expression construct for neutron crystallography.

Authors:  Mahfuza Akter; Chika Inoue; Hirofumi Komori; Nana Matsuda; Takeshi Sakurai; Kunishige Kataoka; Yoshiki Higuchi; Naoki Shibata
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2016-09-22       Impact factor: 1.056

4.  Serial crystallography captures enzyme catalysis in copper nitrite reductase at atomic resolution from one crystal.

Authors:  Sam Horrell; Svetlana V Antonyuk; Robert R Eady; S Samar Hasnain; Michael A Hough; Richard W Strange
Journal:  IUCrJ       Date:  2016-06-15       Impact factor: 4.769

5.  From Gas Phase Observations to Solid State Reality: The Identification and Isolation of Trinuclear Salicylaldoximato Copper Complexes.

Authors:  Benjamin D Roach; Ross S Forgan; Eduardo Kamenetzky; Simon Parsons; Paul G Plieger; Fraser J White; Sidney Woodhouse; Peter A Tasker
Journal:  Molecules       Date:  2022-09-29       Impact factor: 4.927

6.  A new crystal form of Aspergillus oryzae catechol oxidase and evaluation of copper site structures in coupled binuclear copper enzymes.

Authors:  Leena Penttinen; Chiara Rutanen; Markku Saloheimo; Kristiina Kruus; Juha Rouvinen; Nina Hakulinen
Journal:  PLoS One       Date:  2018-05-01       Impact factor: 3.240

7.  Crystal structures of multicopper oxidase CueO G304K mutant: structural basis of the increased laccase activity.

Authors:  Hanqian Wang; Xiaoqing Liu; Jintong Zhao; Qingxia Yue; Yuhua Yan; Zengqiang Gao; Yuhui Dong; Zhiyong Zhang; Yunliu Fan; Jian Tian; Ningfeng Wu; Yong Gong
Journal:  Sci Rep       Date:  2018-09-24       Impact factor: 4.379

Review 8.  Fungal Laccases: The Forefront of Enzymes for Sustainability.

Authors:  Martina Loi; Olga Glazunova; Tatyana Fedorova; Antonio F Logrieco; Giuseppina Mulè
Journal:  J Fungi (Basel)       Date:  2021-12-07
  8 in total

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