Literature DB >> 2459391

Overproduction and purification of Escherichia coli tRNA(2Gln) and its use in crystallization of the glutaminyl-tRNA synthetase-tRNA(Gln) complex.

J J Perona1, R Swanson, T A Steitz, D Söll.   

Abstract

We describe the genetically engineered overproduction of Escherichia coli tRNA(2Gln), its purification by high pressure liquid chromatography (HPLC), and its subsequent use in the growth of crystals of the E. coli glutaminyl-tRNA synthetase-tRNA(Gln) complex. The overproduced tRNA represents 60 to 70% of the total tRNA extracted from the engineered strain. A single anion exchange HPLC column is then sufficient to increase the purity of this isoacceptor to 90 to 95%. Crystals of this material complexed with the monomeric E. coli glutaminyl-tRNA synthetase enzyme were obtained by vapor diffusion from solutions containing sodium citrate as the precipitating agent. The crystals diffract to beyond 2.8 A resolution (1 A = 0.1 nm) and are of the orthorhombic space group C222(1) with unit cell parameters a = 240.5 A, b = 93.9 A, c = 115.7 A. Gel electrophoresis of dissolved crystals demonstrates the presence of both protein and tRNA.

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Year:  1988        PMID: 2459391     DOI: 10.1016/0022-2836(88)90524-4

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  22 in total

1.  An engineered class I transfer RNA with a class II tertiary fold.

Authors:  T A Nissan; B Oliphant; J J Perona
Journal:  RNA       Date:  1999-03       Impact factor: 4.942

2.  Alternative designs for construction of the class II transfer RNA tertiary core.

Authors:  T A Nissan; J J Perona
Journal:  RNA       Date:  2000-11       Impact factor: 4.942

3.  Chemical and enzymatic synthesis of tRNAs for high-throughput crystallization.

Authors:  L D Sherlin; T L Bullock; T A Nissan; J J Perona; F J Lariviere; O C Uhlenbeck; S A Scaringe
Journal:  RNA       Date:  2001-11       Impact factor: 4.942

4.  Solvation change and ion release during aminoacylation by aminoacyl-tRNA synthetases.

Authors:  Rajat Banerjee; Amit Kumar Mandal; Rajesh Saha; Soumi Guha; Soma Samaddar; Anusree Bhattacharyya; Siddhartha Roy
Journal:  Nucleic Acids Res       Date:  2003-10-15       Impact factor: 16.971

5.  Kinetics of tRNA folding monitored by aminoacylation.

Authors:  Hari Bhaskaran; Annia Rodriguez-Hernandez; John J Perona
Journal:  RNA       Date:  2012-01-27       Impact factor: 4.942

Review 6.  The accuracy of aminoacylation--ensuring the fidelity of the genetic code.

Authors:  D Söll
Journal:  Experientia       Date:  1990-12-01

7.  Methods for kinetic and thermodynamic analysis of aminoacyl-tRNA synthetases.

Authors:  Christopher S Francklyn; Eric A First; John J Perona; Ya-Ming Hou
Journal:  Methods       Date:  2008-02       Impact factor: 3.608

8.  A cognate tRNA specific conformational change in glutaminyl-tRNA synthetase and its implication for specificity.

Authors:  A K Mandal; A Bhattacharyya; S Bhattacharyya; T Bhattacharyya; S Roy
Journal:  Protein Sci       Date:  1998-04       Impact factor: 6.725

9.  Acceptor end binding domain interactions ensure correct aminoacylation of transfer RNA.

Authors:  I Weygand-Durasević; E Schwob; D Söll
Journal:  Proc Natl Acad Sci U S A       Date:  1993-03-01       Impact factor: 11.205

10.  Functional communication in the recognition of tRNA by Escherichia coli glutaminyl-tRNA synthetase.

Authors:  M J Rogers; T Adachi; H Inokuchi; D Söll
Journal:  Proc Natl Acad Sci U S A       Date:  1994-01-04       Impact factor: 11.205

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