Literature DB >> 24592288

Universality splitting in distribution of number of miRNA co-targets.

Mahashweta Basu1, Nitai P Bhattacharyya2, P K Mohanty1.   

Abstract

In a recent work (Basu et al., in EPL 105:28007, 2014) it was pointed out that the link-weight distribution of microRNA co-target network of a wide class of species are universal up to scaling. The number cell types, widely accepted as a measure of complexity, turns out to be proportional to these scale-factor. In this article we discuss additional universal features of these networks and show that, this universality splits if one considers distribution of number of common targets of three or more number of microRNAs. These distributions for different species can be collapsed onto two distinct set of universal functions, revealing the fact that the species which appeared in early evolution have different complexity measure compared to those appeared late.

Keywords:  Co-regulation; MicroRNA; Network; Universality

Year:  2014        PMID: 24592288      PMCID: PMC3933633          DOI: 10.1007/s11693-014-9131-0

Source DB:  PubMed          Journal:  Syst Synth Biol        ISSN: 1872-5325


  17 in total

Review 1.  MicroRNAs: genomics, biogenesis, mechanism, and function.

Authors:  David P Bartel
Journal:  Cell       Date:  2004-01-23       Impact factor: 41.582

Review 2.  The functions of animal microRNAs.

Authors:  Victor Ambros
Journal:  Nature       Date:  2004-09-16       Impact factor: 49.962

Review 3.  Control of protein synthesis and mRNA degradation by microRNAs.

Authors:  Jidong Liu
Journal:  Curr Opin Cell Biol       Date:  2008-03-10       Impact factor: 8.382

Review 4.  MicroRNA: function, detection, and bioanalysis.

Authors:  Haifeng Dong; Jianping Lei; Lin Ding; Yongqiang Wen; Huangxian Ju; Xueji Zhang
Journal:  Chem Rev       Date:  2013-05-22       Impact factor: 60.622

5.  Human microRNA clusters: genomic organization and expression profile in leukemia cell lines.

Authors:  Jia Yu; Fang Wang; Gui-Hua Yang; Fan-Long Wang; Yan-Ni Ma; Zhan-Wen Du; Jun-Wu Zhang
Journal:  Biochem Biophys Res Commun       Date:  2006-08-11       Impact factor: 3.575

6.  MicroRNA-210 as a novel therapy for treatment of ischemic heart disease.

Authors:  Shijun Hu; Mei Huang; Zongjin Li; Fangjun Jia; Zhumur Ghosh; Maarten A Lijkwan; Pasquale Fasanaro; Ning Sun; Xi Wang; Fabio Martelli; Robert C Robbins; Joseph C Wu
Journal:  Circulation       Date:  2010-09-14       Impact factor: 29.690

7.  Prediction of mammalian microRNA targets.

Authors:  Benjamin P Lewis; I-hung Shih; Matthew W Jones-Rhoades; David P Bartel; Christopher B Burge
Journal:  Cell       Date:  2003-12-26       Impact factor: 41.582

8.  MiRNA-miRNA synergistic network: construction via co-regulating functional modules and disease miRNA topological features.

Authors:  Juan Xu; Chuan-Xing Li; Yong-Sheng Li; Jun-Ying Lv; Ye Ma; Ting-Ting Shao; Liang-De Xu; Ying-Ying Wang; Lei Du; Yun-Peng Zhang; Wei Jiang; Chun-Quan Li; Yun Xiao; Xia Li
Journal:  Nucleic Acids Res       Date:  2010-10-06       Impact factor: 16.971

9.  Therapeutic Delivery of MicroRNA-29b by Cationic Lipoplexes for Lung Cancer.

Authors:  Yun Wu; Melissa Crawford; Yicheng Mao; Robert J Lee; Ian C Davis; Terry S Elton; L James Lee; Serge P Nana-Sinkam
Journal:  Mol Ther Nucleic Acids       Date:  2013-04-16       Impact factor: 10.183

10.  MicroRNA as therapeutic targets for treatment of depression.

Authors:  Katelin F Hansen; Karl Obrietan
Journal:  Neuropsychiatr Dis Treat       Date:  2013-07-29       Impact factor: 2.570

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.