Literature DB >> 24576434

Unfamiliar metabolic links in the central carbon metabolism.

Georg Fuchs1, Ivan A Berg2.   

Abstract

The central carbon metabolism of all organisms is considered to follow a well established fixed scheme. However, recent studies of autotrophic carbon fixation in prokaryotes revealed unfamiliar metabolic links. A new route interconnects acetyl-coenzyme A (CoA) via 3-hydroxypropionate with succinyl-CoA. Succinyl-CoA in turn may be metabolized via 4-hydroxybutyrate to two molecules of acetyl-CoA; a reversal of this route would result in the assimilation of two molecules of acetyl-CoA into C4 compounds. C5-dicarboxylic acids are a rather neglected class of metabolites; yet, they play a key role not only in one of the CO2 fixation cycles, but also in two acetate assimilation pathways that replace the glyoxylate cycle. C5 compounds such as ethylmalonate, methylsuccinate, methylmalate, mesaconate, itaconate and citramalate or their CoA esters are thereby linked to the acetyl-CoA, propionyl-CoA, glyoxylate and pyruvate pools. A novel carboxylase/reductase converts crotonyl-CoA into ethylmalonyl-CoA; similar reductive carboxylations apply to other alpha-beta-unsaturated carboxy-CoA thioesters. These unfamiliar metabolic links may provide useful tools for metabolic engineering.
Copyright © 2014 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  3-Hydroxypropionate; 4-Hydroxybutyrate; Acetyl-CoA assimilation; Autotrophic CO(2) fixation; C(5) dicarboxylic acids

Mesh:

Substances:

Year:  2014        PMID: 24576434     DOI: 10.1016/j.jbiotec.2014.02.015

Source DB:  PubMed          Journal:  J Biotechnol        ISSN: 0168-1656            Impact factor:   3.307


  14 in total

1.  Mesaconase Activity of Class I Fumarase Contributes to Mesaconate Utilization by Burkholderia xenovorans.

Authors:  Miriam Kronen; Jahminy Sasikaran; Ivan A Berg
Journal:  Appl Environ Microbiol       Date:  2015-06-12       Impact factor: 4.792

2.  Malonic semialdehyde reductase from the archaeon Nitrosopumilus maritimus is involved in the autotrophic 3-hydroxypropionate/4-hydroxybutyrate cycle.

Authors:  Julia Otte; Achim Mall; Daniel M Schubert; Martin Könneke; Ivan A Berg
Journal:  Appl Environ Microbiol       Date:  2014-12-29       Impact factor: 4.792

3.  Fox Cluster determinants for iron biooxidation in the extremely thermoacidophilic Sulfolobaceae.

Authors:  James A Counts; Nicholas P Vitko; Robert M Kelly
Journal:  Environ Microbiol       Date:  2021-08-30       Impact factor: 5.491

4.  Nontemplate-driven polymers: clues to a minimal form of organization closure at the early stages of living systems.

Authors:  Miguel Ángel Freire
Journal:  Theory Biosci       Date:  2015-04-28       Impact factor: 1.919

5.  Arcobacter peruensis sp. nov., a Chemolithoheterotroph Isolated from Sulfide- and Organic-Rich Coastal Waters off Peru.

Authors:  Cameron M Callbeck; Chris Pelzer; Gaute Lavik; Timothy G Ferdelman; Jon S Graf; Bram Vekeman; Harald Schunck; Sten Littmann; Bernhard M Fuchs; Philipp F Hach; Tim Kalvelage; Ruth A Schmitz; Marcel M M Kuypers
Journal:  Appl Environ Microbiol       Date:  2019-11-27       Impact factor: 4.792

6.  Mesaconase/Fumarase FumD in Escherichia coli O157:H7 and Promiscuity of Escherichia coli Class I Fumarases FumA and FumB.

Authors:  Miriam Kronen; Ivan A Berg
Journal:  PLoS One       Date:  2015-12-14       Impact factor: 3.240

7.  An in vitro synthetic biosystem based on acetate for production of phloroglucinol.

Authors:  Rubing Zhang; Wei Liu; Yujin Cao; Xin Xu; Mo Xian; Huizhou Liu
Journal:  BMC Biotechnol       Date:  2017-08-08       Impact factor: 2.563

8.  Sulfur-Oxidizing Symbionts without Canonical Genes for Autotrophic CO2 Fixation.

Authors:  Brandon K B Seah; Chakkiath Paul Antony; Bruno Huettel; Jan Zarzycki; Lennart Schada von Borzyskowski; Tobias J Erb; Angela Kouris; Manuel Kleiner; Manuel Liebeke; Nicole Dubilier; Harald R Gruber-Vodicka
Journal:  mBio       Date:  2019-06-25       Impact factor: 7.867

Review 9.  Biocatalysis for the application of CO2 as a chemical feedstock.

Authors:  Apostolos Alissandratos; Christopher J Easton
Journal:  Beilstein J Org Chem       Date:  2015-12-01       Impact factor: 2.883

10.  The activity of the C4-dicarboxylic acid chemoreceptor of Pseudomonas aeruginosa is controlled by chemoattractants and antagonists.

Authors:  David Martín-Mora; Álvaro Ortega; Francisco J Pérez-Maldonado; Tino Krell; Miguel A Matilla
Journal:  Sci Rep       Date:  2018-02-01       Impact factor: 4.379

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