Literature DB >> 24571363

Will different OTU delineation methods change interpretation of arbuscular mycorrhizal fungal community patterns?

Ylva Lekberg1,2, Sean M Gibbons1,3,4, Søren Rosendahl5.   

Abstract

Keywords:  454-Titanium sequencing; QIIME; arbuscular mycorrhizal fungi (AMF); monophyletic clade; operational taxonomic unit (OTU) delineation; universal threshold

Mesh：

Year:  2014        PMID： 24571363     DOI： 10.1111/nph.12758

Source DB:  PubMed          Journal:  New Phytol        ISSN： 0028-646X            Impact factor:   10.151


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  9 in total

1.  Organic amendments increase phylogenetic diversity of arbuscular mycorrhizal fungi in acid soil contaminated by trace elements.

Authors:  María Del Mar Montiel-Rozas; Álvaro López-García; Rasmus Kjøller; Engracia Madejón; Søren Rosendahl
Journal:  Mycorrhiza       Date:  2016-04-12       Impact factor: 3.387

2.  Ignored diversity of arbuscular mycorrhizal fungi in co-occurring mycotrophic and non-mycotrophic plants.

Authors:  Yutao Wang; Yingwei Li; Shaoshan Li; Søren Rosendahl
Journal:  Mycorrhiza       Date:  2020-11-02       Impact factor: 3.387

3.  Community dynamics of arbuscular mycorrhizal fungi in high-input and intensively irrigated rice cultivation systems.

Authors:  Yutao Wang; Ting Li; Yingwei Li; Lars Olof Björn; Søren Rosendahl; Pål Axel Olsson; Shaoshan Li; Xuelin Fu
Journal:  Appl Environ Microbiol       Date:  2015-02-13       Impact factor: 4.792

4.  Mycorrhizal fungal communities in coastal sand dunes and heaths investigated by pyrosequencing analyses.

Authors:  Synnøve Botnen; Håvard Kauserud; Tor Carlsen; Rakel Blaalid; Klaus Høiland
Journal:  Mycorrhiza       Date:  2015-01-20       Impact factor: 3.387

Review 5.  Microbial diversity--exploration of natural ecosystems and microbiomes.

Authors:  Sean M Gibbons; Jack A Gilbert
Journal:  Curr Opin Genet Dev       Date:  2015-11-18       Impact factor: 5.578

6.  Phylogenetically Structured Differences in rRNA Gene Sequence Variation among Species of Arbuscular Mycorrhizal Fungi and Their Implications for Sequence Clustering.

Authors:  Geoffrey L House; Saliya Ekanayake; Yang Ruan; Ursel M E Schütte; Wittaya Kaonongbua; Geoffrey Fox; Yuzhen Ye; James D Bever
Journal:  Appl Environ Microbiol       Date:  2016-07-29       Impact factor: 4.792

7.  Hierarchical neighbor effects on mycorrhizal community structure and function.

Authors:  Holly V Moeller; Ian A Dickie; Duane A Peltzer; Tadashi Fukami
Journal:  Ecol Evol       Date:  2016-07-05       Impact factor: 2.912

8.  Unambiguous identification of fungi: where do we stand and how accurate and precise is fungal DNA barcoding?

Authors:  Robert Lücking; M Catherine Aime; Barbara Robbertse; Andrew N Miller; Hiran A Ariyawansa; Takayuki Aoki; Gianluigi Cardinali; Pedro W Crous; Irina S Druzhinina; David M Geiser; David L Hawksworth; Kevin D Hyde; Laszlo Irinyi; Rajesh Jeewon; Peter R Johnston; Paul M Kirk; Elaine Malosso; Tom W May; Wieland Meyer; Maarja Öpik; Vincent Robert; Marc Stadler; Marco Thines; Duong Vu; Andrey M Yurkov; Ning Zhang; Conrad L Schoch
Journal:  IMA Fungus       Date:  2020-07-10       Impact factor: 3.515

9.  Mycoheterotrophic plants preferentially target arbuscular mycorrhizal fungi that are highly connected to autotrophic plants.

Authors:  Sofia I F Gomes; Miguel A Fortuna; Jordi Bascompte; Vincent S F T Merckx
Journal:  New Phytol       Date:  2022-07-07       Impact factor: 10.323
  9 in total

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