| Literature DB >> 24569300 |
Piotr Stalke1, Magda Rybicka2, Anna Wróblewska2, Marcin Dreczewski1, Ewa Stracewska1, Tomasz Smiatacz1, Krzysztof Piotr Bielawski2.
Abstract
BACKGROUND: Success in treating hepatitis B virus (HBV) infection with nucleoside analogues drugs is limited by the emergence of drug-resistant viral strains upon prolonged therapy. In addition to mutation patterns in the viral polymerase gene, host factors are assumed to contribute to failure of treatment in chronic HBV infections. The aim of this study was to analyze the correlation between efficacy of antiviral therapy and the prevalence of HBV pretreatment drug-resistant variants. We also analyzed the role of heterogeneity in the promoter region of the IL-10 on the HBV pol/s gene polymorphisms and efficacy of analogues-driven therapy.Entities:
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Year: 2014 PMID: 24569300 PMCID: PMC3943711 DOI: 10.12659/MSM.889788
Source DB: PubMed Journal: Med Sci Monit ISSN: 1234-1010
PCR thermal cycling parameters.
| Step | Temperature/duration | ||||||
|---|---|---|---|---|---|---|---|
| 1st PCR | 2nd PCR | HBV genotyping | rs1082 | rs819 | rs592 | ||
| No. of amplification cycles | 35 | 35 | 35 | 33 | 33 | 33 | |
| Initial inactivation/denaturation | 95°C/10 min | 95°C/10 min | 95°C/10 min | 95°C/3 min | 95°C/3 min | 95°C/3 min | |
| Parameters of amplification | Denaturation | 94°C/30 sec | 94°C/30 sec | 94°C/30 sec | 95°C/30 sec | 95°C/30 sec | 95°C/30 sec |
| Annealing | 56°C/30sec | 57°C/30 sec | 57°C/30 sec | 57.9°C/30 sec | 61.4°C/30 sec | 53.7°C/30 sec | |
| Extension | 72°C/30 sec | 72°C/30 sec | 72°C/90 sec | 72°C/60 sec | 72°C/60 sec | 72°C/60 sec | |
| Final extension | 72°C/10 min | 72°C/10 min | 72°C/10 min | 72°C/1 min | 72°C/1 min | 72°C/1 min | |
| Hold | 4°C | 4°C | 4°C | 4°C | 4°C | 4°C | |
Figure 1An example of results for 7 patients (28, 75, 76, 87, 90, 97) obtained for rs871. K−c and K−t are negative controls for C and T tubes.
Demographic and clinical characteristics in responder v/s nonresponder and naïve v/s NAs-experienced CHB patients.
| Analogues antiviral therapy | Significance p<0.05) | Analogues antiviral therapy | Significance p<0.05) | ||||
|---|---|---|---|---|---|---|---|
| responder (n=28) | nonresponder (n=26) | Naïve (n=27) | NAs experienced (n=27) | ||||
| Gender (male/female) | 10/18 | 19/7 | 0.0066 | 11/16 | 18/9 | 0.10 | |
| Age (years) | 43.4±1.98 | 54.4±3.51 | 0.011 | 47.67±3.3 | 49.70±2.59 | 0.62 | |
| ALT (IU/l) | 136±41 | 76±11 | 0.75 | 120±40 | 95±20 | 0.74 | |
| Baseline viral load (kIU/ml) | 13702±8385 | 57857±15205 | 0.0035 | 33989±12765 | 35935±12814 | 0.98 | |
| HBe Ag (reactive/nonreactive) | 8/20 | 15/11 | 0.033 | 9/18 | 14/14 | 0.25 | |
| HBe Ab (reactive/nonreactive) | 21/7 | 12/14 | 0.032 | 19/8 | 14/13 | 0.25 | |
| Baseline HBV drug-resistant variants | 19/9 | 17/9 | 0.86 | 13/14 | 23/4 | 0.019 | |
| Immunocompromised (Yes/No) | 10/17 | 8/17 | 0.71 | 8/19 | 10/15 | 0.52 | |
| NAs therapy | 13/15 | 14/12 | 0.60 | NA$ | NA | NA | |
| Antiviral therapy | Lamivudine | 16 | 14 | 0.029 | 23 | 7 | 0.0001 |
| Entecavir | 6 | 10 | 4 | 12 | |||
| Tenofovir | 6 | 1 | 0 | 7 | |||
| lamivudine + adefovir | 0 | 1 | 0 | 1 | |||
| Liver biopsy | inflammation grade | 2 | 2 | 0.50 | 1.75 | 2 | 0.70 |
| fibrosis stage | 1.5 | 1.5 | 0.99 | 1.5 | 1.5 | 0.42 | |
Data are presented as a mean value ± standard error (SE);
data presented as a median value;
the presence of HBV drug-resistant minor variant before NAs therapy;
nucleoside/nucleotide analogues therapy;
not applicable.
Figure 2HBV YMDD variants obtained for 7 patients (A–F) during MSSCP (A) and MALDI-TOF MS analysis (B).
Univariate and multivariate logistic regression analyses of host and viral predicting NAs therapy response factors in CHB patients.
| Analogues antiviral therapy | Univariate analysis | Multivariate analysis | ||||
|---|---|---|---|---|---|---|
| Responder (n=28) | Nonresponder (n=26) | OR (95% Cl) | p value | OR (95% Cl) | p value | |
| Age (year) | 43.4±1.98 | 54.4±3.51 | 0.95 (0.91–0.99) | 0.013 | 0.90 (0.83–0.98) | 0.011 |
| Female gender | 18 | 7 | 4.88 (1.49–16.04) | 0.007 | 10.3 (1.60–65.81) | 0.011 |
| Baseline HBV viral load (kIU/ml) | 13.702±8.385 | 57.857±15.205 | 0.999987 (0.99997–0.999998) | 0.019 | 0.999961 (0.99993–0.99999) | 0.008 |
| Baseline HBeAg (reactive) | 8 | 15 | 0.29 (0.09–0.90) | 0.033 | ||
| Baseline ALT (IU/l) | 136±41 | 76±11 | 1.003 (0.998–1.009) | 0.22 | 1.01 (0.99–1.02) | 0.178 |
| Previous NAs | 15 | 12 | 1.35 (0.45–4.03) | 0.586 | ||
| Baseline drug resistance presence | 19 | 17 | 1.12 (0.36–3.47) | 0.85 | ||
| Liver biopsy inflammation activity | 2 | 2 | 1.42 (0.60–3.35) | 0.41 | ||
| Liver biopsy fibrosis stage | 1.5 | 1.5 | 0.93 (0.46–1.93) | 0.86 | ||
| ATA IL-10 haplotype | 8 | 11 | 0.54 (0.18–1.69) | 0.29 | ||
| Immunocompetent patient | 17 | 17 | 0.8 (0.25–2.59) | 0.7 | 0.09 (0.009–0.93) | 0.038 |
Data are presented as a mean value ± standard error (SE);
data presented as a median value;
nucleoside/nucleotide analogues;
the presence of HBV drug-resistant minor variant before NAs therapy.
Distribution of alleles promoter region IL-10 in CHB patients.
| IL-10 polymorphism | Analogues antiviral therapy | Significance p<0.05) | |
|---|---|---|---|
| Responder (n=28) | Nonresponder (n=26) | ||
| rs1800896 (1082) | |||
| GG | 4 | 4 | 0.88 |
| AA | 3 | 3 | |
| GA | 21 | 19 | |
| rs1800871 (819) | |||
| CC | 20 | 15 | 0.26 |
| TT | 0 | 1 | |
| CT | 8 | 10 | |
| rs1800872 (592) | |||
| CC | 19 | 13 | 0.26 |
| AA | 2 | 1 | |
| CA | 7 | 12 | |
| ATA haplotype IL-10 (present/absent) | 8 | 11 | 0.3 |