Literature DB >> 24567323

Regulation of Ku-DNA association by Yku70 C-terminal tail and SUMO modification.

Lisa E Hang1, Christopher R Lopez, Xianpeng Liu, Jaime M Williams, Inn Chung, Lei Wei, Alison A Bertuch, Xiaolan Zhao.   

Abstract

The Ku70-Ku80 ring complex encloses DNA ends to facilitate telomere maintenance and DNA break repair. Many studies focus on the ring-forming regions of subunits Ku70 and Ku80. Less is known about the Ku70 C-terminal tail, which lies outside the ring. Our results suggest that this region is responsible for dynamic sumoylation of Yku70 upon DNA association in budding yeast. Mutating a cluster of five lysines in this region largely eliminates Yku70 sumoylation. Chromatin immunoprecipitation analyses show that yku70 mutants with these lysines replaced by arginines exhibit reduced Ku-DNA association at both telomeres and internal DNA breaks. Consistent with this physical evidence, Yku70 sumoylation deficiency is associated with impaired ability to block DNA end resection and suppression of multiple defects caused by inefficient resection. Correlating with these, yku70 mutants with reduced sumoylation levels exhibit shorter telomeres, increased G overhang levels, and altered levels of non-homologous end joining. We also show that diminution of sumoylation does not affect Yku70 protein levels or its interactions with protein and RNA partners. These results suggest a model whereby Yku70 sumoylation upon DNA association strengthens Ku-DNA interaction to promote multiple functions of Ku.

Entities:  

Keywords:  DNA Repair; Ku Complex; Molecular Genetics; Sumoylation; Telomeres; Yeast

Mesh:

Substances:

Year:  2014        PMID: 24567323      PMCID: PMC4036155          DOI: 10.1074/jbc.M113.526178

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  39 in total

1.  Saccharomyces cerevisiae Mre11/Rad50/Xrs2 and Ku proteins regulate association of Exo1 and Dna2 with DNA breaks.

Authors:  Eun Yong Shim; Woo-Hyun Chung; Matthew L Nicolette; Yu Zhang; Melody Davis; Zhu Zhu; Tanya T Paull; Grzegorz Ira; Sang Eun Lee
Journal:  EMBO J       Date:  2010-09-10       Impact factor: 11.598

2.  Ku prevents Exo1 and Sgs1-dependent resection of DNA ends in the absence of a functional MRX complex or Sae2.

Authors:  Eleni P Mimitou; Lorraine S Symington
Journal:  EMBO J       Date:  2010-08-20       Impact factor: 11.598

3.  The SMC5/6 complex maintains telomere length in ALT cancer cells through SUMOylation of telomere-binding proteins.

Authors:  Patrick Ryan Potts; Hongtao Yu
Journal:  Nat Struct Mol Biol       Date:  2007-06-24       Impact factor: 15.369

4.  Sgs1 helicase and two nucleases Dna2 and Exo1 resect DNA double-strand break ends.

Authors:  Zhu Zhu; Woo-Hyun Chung; Eun Yong Shim; Sang Eun Lee; Grzegorz Ira
Journal:  Cell       Date:  2008-09-19       Impact factor: 41.582

5.  Sae2, Exo1 and Sgs1 collaborate in DNA double-strand break processing.

Authors:  Eleni P Mimitou; Lorraine S Symington
Journal:  Nature       Date:  2008-09-21       Impact factor: 49.962

6.  SUMOylation regulates telomere length homeostasis by targeting Cdc13.

Authors:  Lisa E Hang; Xianpeng Liu; Iris Cheung; Yan Yang; Xiaolan Zhao
Journal:  Nat Struct Mol Biol       Date:  2011-07-10       Impact factor: 15.369

7.  Shelterin-like proteins and Yku inhibit nucleolytic processing of Saccharomyces cerevisiae telomeres.

Authors:  Diego Bonetti; Michela Clerici; Savani Anbalagan; Marina Martina; Giovanna Lucchini; Maria Pia Longhese
Journal:  PLoS Genet       Date:  2010-05-27       Impact factor: 5.917

8.  Topoisomerase I-dependent viability loss in saccharomyces cerevisiae mutants defective in both SUMO conjugation and DNA repair.

Authors:  Xiaole L Chen; Hannah R Silver; Ling Xiong; Irina Belichenko; Caroline Adegite; Erica S Johnson
Journal:  Genetics       Date:  2007-07-01       Impact factor: 4.562

9.  The PIAS homologue Siz2 regulates perinuclear telomere position and telomerase activity in budding yeast.

Authors:  Helder C Ferreira; Brian Luke; Heiko Schober; Véronique Kalck; Joachim Lingner; Susan M Gasser
Journal:  Nat Cell Biol       Date:  2011-06-12       Impact factor: 28.824

10.  Ku must load directly onto the chromosome end in order to mediate its telomeric functions.

Authors:  Christopher R Lopez; Albert Ribes-Zamora; Sandra M Indiviglio; Christopher L Williams; Svasti Haricharan; Alison A Bertuch
Journal:  PLoS Genet       Date:  2011-08-11       Impact factor: 5.917

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  15 in total

Review 1.  The Ku complex: recent advances and emerging roles outside of non-homologous end-joining.

Authors:  Sanna Abbasi; Gursimran Parmar; Rachel D Kelly; Nileeka Balasuriya; Caroline Schild-Poulter
Journal:  Cell Mol Life Sci       Date:  2021-04-15       Impact factor: 9.261

2.  Identification of SUMO modification sites in the base excision repair protein, Ntg1.

Authors:  Daniel B Swartzlander; Annie J McPherson; Harry R Powers; Kristin L Limpose; Emily G Kuiper; Natalya P Degtyareva; Anita H Corbett; Paul W Doetsch
Journal:  DNA Repair (Amst)       Date:  2016-10-31

Review 3.  SUMO-mediated regulation of DNA damage repair and responses.

Authors:  Prabha Sarangi; Xiaolan Zhao
Journal:  Trends Biochem Sci       Date:  2015-03-13       Impact factor: 13.807

4.  SETD4-mediated KU70 methylation suppresses apoptosis.

Authors:  Yuan Wang; Bochao Liu; Huimei Lu; Jingmei Liu; Peter J Romanienko; Gaetano T Montelione; Zhiyuan Shen
Journal:  Cell Rep       Date:  2022-05-10       Impact factor: 9.995

5.  Comparative ultrastructure of CRM1-Nucleolar bodies (CNoBs), Intranucleolar bodies (INBs) and hybrid PML/p62 bodies uncovers new facets of nuclear body dynamic and diversity.

Authors:  Sylvie Souquere; Dominique Weil; Gérard Pierron
Journal:  Nucleus       Date:  2015       Impact factor: 4.197

6.  Sumoylation of the Rad1 nuclease promotes DNA repair and regulates its DNA association.

Authors:  Prabha Sarangi; Zdenka Bartosova; Veronika Altmannova; Cory Holland; Melita Chavdarova; Sang Eun Lee; Lumir Krejci; Xiaolan Zhao
Journal:  Nucleic Acids Res       Date:  2014-04-20       Impact factor: 16.971

7.  Sumoylation influences DNA break repair partly by increasing the solubility of a conserved end resection protein.

Authors:  Prabha Sarangi; Roland Steinacher; Veronika Altmannova; Qiong Fu; Tanya T Paull; Lumir Krejci; Matthew C Whitby; Xiaolan Zhao
Journal:  PLoS Genet       Date:  2015-01-08       Impact factor: 5.917

8.  C-terminal region of bacterial Ku controls DNA bridging, DNA threading and recruitment of DNA ligase D for double strand breaks repair.

Authors:  Stephen McGovern; Sonia Baconnais; Pierre Roblin; Pierre Nicolas; Pascal Drevet; Héloïse Simonson; Olivier Piétrement; Jean-Baptiste Charbonnier; Eric Le Cam; Philippe Noirot; François Lecointe
Journal:  Nucleic Acids Res       Date:  2016-03-09       Impact factor: 16.971

Review 9.  SUMO, a small, but powerful, regulator of double-strand break repair.

Authors:  Alexander J Garvin; Joanna R Morris
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-10-05       Impact factor: 6.237

10.  A Chemical and Enzymatic Approach to Study Site-Specific Sumoylation.

Authors:  Claudio P Albuquerque; Eyan Yeung; Shawn Ma; Ting Fu; Kevin D Corbett; Huilin Zhou
Journal:  PLoS One       Date:  2015-12-03       Impact factor: 3.240

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