Literature DB >> 24567163

Scytonin, a novel cyanobacterial photoprotective pigment: calculations of Raman spectroscopic biosignatures.

Tereza Varnali1, Howell G M Edwards.   

Abstract

The Raman spectrum of scytonin, a novel derivative of the parent scytonemin, is predicted from DFT calculations of the most stable, lowest energy, conformational structure. The diagnostic importance of this study relates to the spectral ability to discriminate between scytonemin and its derivatives alone or in admixture with geological matrices from identified characteristic Raman spectral signatures. The successful interpretation of biosignatures from a wide range of cyanobacterial extremophilic colonization in terrestrial and extraterrestrial scenarios is a fundamental requirement of the evaluation of robotic spectroscopic instrumentation in search for life missions. Scytonemin is produced exclusively by cyanobacterial colonies in environmentally stressed habitats and is widely recognized as a key target biomarker molecule in this enterprise. Here, the detailed theoretical analysis of the structure of scytonin enables a protocol to be established for the recognition of characteristic bands in its Raman spectrum and to accomplish the successful differentiation between scytonin and scytonemin as well as other scytonemin derivatives such as the dimethoxy and tetramethoxy compounds that have been isolated from cyanobacterial colonies but which have not yet been characterized spectroscopically. The results of this study will facilitate an extension of the database capability for miniaturized Raman spectrometers which will be carried on board search for life robotic missions to Mars, Europa, and Titan.

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Year:  2014        PMID: 24567163     DOI: 10.1007/s00894-014-2157-0

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  13 in total

Review 1.  Ultraviolet radiation screening compounds.

Authors:  C S Cockell; J Knowland
Journal:  Biol Rev Camb Philos Soc       Date:  1999-08

2.  Vibrational raman spectroscopic study of scytonemin, the UV-protective cyanobacterial pigment.

Authors:  H G Edwards; F Garcia-Pichel; E M Newton; D D Wynn-Williams
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2000-01       Impact factor: 4.098

3.  New pigments from the terrestrial cyanobacterium Scytonema sp. collected on the Mitaraka inselberg, French Guyana.

Authors:  V Bultel-Poncé; F Felix-Theodose; C Sarthou; J-F Ponge; B Bodo
Journal:  J Nat Prod       Date:  2004-04       Impact factor: 4.050

4.  Ab initio calculations of scytonemin derivatives of relevance to extremophile characterization by Raman spectroscopy.

Authors:  Tereza Varnali; Howell G M Edwards
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2010-07-13       Impact factor: 4.226

5.  Microbial colonization of halite from the hyper-arid Atacama Desert studied by Raman spectroscopy.

Authors:  P Vítek; H G M Edwards; J Jehlicka; C Ascaso; A De los Ríos; S Valea; S E Jorge-Villar; A F Davila; J Wierzchos
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2010-07-13       Impact factor: 4.226

6.  Iron-scytonemin complexes: DFT calculations on new UV protectants for terrestrial cyanobacteria and astrobiological implications.

Authors:  Tereza Varnali; Howell G M Edwards
Journal:  Astrobiology       Date:  2010-09-29       Impact factor: 4.335

7.  New scale factors for harmonic vibrational frequencies using the B3LYP density functional method with the triple-zeta basis set 6-311+G(d,p).

Authors:  M P Andersson; P Uvdal
Journal:  J Phys Chem A       Date:  2005-03-31       Impact factor: 2.781

8.  Theoretical study of novel complexed structures for methoxy derivatives of scytonemin: potential biomarkers in iron-rich stressed environments.

Authors:  Tereza Varnali; Howell G M Edwards
Journal:  Astrobiology       Date:  2013-08-30       Impact factor: 4.335

9.  Reduced and oxidised scytonemin: theoretical protocol for Raman spectroscopic identification of potential key biomolecules for astrobiology.

Authors:  Tereza Varnali; Howell G M Edwards
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2013-08-09       Impact factor: 4.098

10.  The structure of scytonemin, an ultraviolet sunscreen pigment from the sheaths of cyanobacteria.

Authors:  P J Proteau; W H Gerwick; F Garcia-Pichel; R Castenholz
Journal:  Experientia       Date:  1993-09-15
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