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Literature DB >> 24562429

Novel circular single-stranded DNA virus from turkey faeces.

Gábor Reuter¹, Ákos Boros, Eric Delwart, Péter Pankovics.

Abstract

Recently, a novel group of unclassified single-stranded (ss) circular small DNA viruses (called stool-associated circular virus; SCV) were identified in fecal samples of three mammalian species, namely, chimpanzee (ChiSCV), pig (PoSCV) and cattle (BoSCV). In this study, a novel genomic relative of stool-associated circular virus (TuSCV, KF880727) was detected in faeces of an avian species, namely, domestic turkey (Meleagris gallopavo). The complete TuSCV genome is 2479 nt long and has two open reading frames (ORF), which are bidirectionally transcribed and separated by intergenic regions. The ORF1 (replicase) and ORF2 (capsid) proteins have 77 % and 48 % aa sequence identity to different porcine-origin SCVs.

Entities: Gene Species

Mesh：

Substances：
DNA, Circular

Year: 2014 PMID： 24562429 DOI： 10.1007/s00705-014-2025-3

Source DB: PubMed Journal: Arch Virol ISSN： 0304-8608 Impact factor: 2.574

Keyword Cloud
Cited

33 in total

1. Detection and Molecular Characterization of Gemycircularvirus from Environmental Samples in Brazil.

Authors: Matheus Ribeiro da Silva Assis; Carmen Baur Vieira; Julia Monassa Fioretti; Mônica Simões Rocha; Pedro Ivo Neves de Almeida; Marize Pereira Miagostovich; Tulio Machado Fumian
Journal: Food Environ Virol Date: 2016-07-08 Impact factor: 2.778

Review 2. Taxonomic Changes for Human and Animal Viruses, 2016 to 2018.

Authors: Michael J Loeffelholz; Bradley W Fenwick
Journal: J Clin Microbiol Date: 2019-01-30 Impact factor: 5.948

3. The fecal virome of South and Central American children with diarrhea includes small circular DNA viral genomes of unknown origin.

Authors: Tung Gia Phan; Antonio Charlys da Costa; Juana Del Valle Mendoza; Filemon Bucardo-Rivera; Johan Nordgren; Miguel O'Ryan; Xutao Deng; Eric Delwart
Journal: Arch Virol Date: 2016-01-19 Impact factor: 2.574

10. Isolation of a Complete Circular Virus Genome Sequence from an Alaskan Black-Capped Chickadee (Poecile atricapillus) Gastrointestinal Tract Sample.

Authors: Zachary R Hanna; Charles Runckel; Jérôme Fuchs; Joseph L DeRisi; David P Mindell; Caroline Van Hemert; Colleen M Handel; John P Dumbacher
Journal: Genome Announc Date: 2015-09-24

Novel circular single-stranded DNA virus from turkey faeces.

1. Detection and Molecular Characterization of Gemycircularvirus from Environmental Samples in Brazil.

Review 2. Taxonomic Changes for Human and Animal Viruses, 2016 to 2018.

3. The fecal virome of South and Central American children with diarrhea includes small circular DNA viral genomes of unknown origin.

4. Case-Control Comparison of Enteric Viromes in Captive Rhesus Macaques with Acute or Idiopathic Chronic Diarrhea.

5. A new gyrovirus in human feces.

6. Differential Viral Genome Diversity of Healthy and RSS-Affected Broiler Flocks.

7. Chicken skin virome analyzed by high-throughput sequencing shows a composition highly different from human skin.

8. Discovery of a novel Parvovirinae virus, porcine parvovirus 7, by metagenomic sequencing of porcine rectal swabs.

9. Fecal virome analysis of three carnivores reveals a novel nodavirus and multiple gemycircularviruses.

10. Isolation of a Complete Circular Virus Genome Sequence from an Alaskan Black-Capped Chickadee (Poecile atricapillus) Gastrointestinal Tract Sample.