Literature DB >> 24557691

An efficient finite element approach for modeling fibrotic clefts in the heart.

Caroline Mendonca Costa, Fernando O Campos, Anton J Prassl, Rodrigo Weber dos Santos, Damián Sánchez-Quintana, Helmut Ahammer, Ernst Hofer, Gernot Plank.   

Abstract

Advanced medical imaging technologies provide a wealth of information on cardiac anatomy and structure at a paracellular resolution, allowing to identify microstructural discontinuities which disrupt the intracellular matrix. Current state-of-the-art computer models built upon such datasets account for increasingly finer anatomical details, however, structural discontinuities at the paracellular level are typically discarded in the model generation process, owing to the significant costs which incur when using high resolutions for explicit representation. In this study, a novel discontinuous finite element (dFE) approach for discretizing the bidomain equations is presented, which accounts for fine-scale structures in a computer model without the need to increase spatial resolution. In the dFE method, this is achieved by imposing infinitely thin lines of electrical insulation along edges of finite elements which approximate the geometry of discontinuities in the intracellular matrix. Simulation results demonstrate that the dFE approach accounts for effects induced by microscopic size scale discontinuities, such as the formation of microscopic virtual electrodes, with vast computational savings as compared to high resolution continuous finite element models. Moreover, the method can be implemented in any standard continuous finite element code with minor effort.

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Year:  2014        PMID: 24557691      PMCID: PMC3971459          DOI: 10.1109/TBME.2013.2292320

Source DB:  PubMed          Journal:  IEEE Trans Biomed Eng        ISSN: 0018-9294            Impact factor:   4.538


  29 in total

1.  Computational tools for modeling electrical activity in cardiac tissue.

Authors:  Edward J Vigmond; Matt Hughes; G Plank; L Joshua Leon
Journal:  J Electrocardiol       Date:  2003       Impact factor: 1.438

2.  Evaluating intramural virtual electrodes in the myocardial wedge preparation: simulations of experimental conditions.

Authors:  G Plank; A Prassl; E Hofer; N A Trayanova
Journal:  Biophys J       Date:  2007-11-09       Impact factor: 4.033

3.  Towards real-time simulation of cardiac electrophysiology in a human heart at high resolution.

Authors:  David F Richards; James N Glosli; Erik W Draeger; Arthur A Mirin; Bor Chan; Jean-Luc Fattebert; William D Krauss; Tomas Oppelstrup; Chris J Butler; John A Gunnels; Viatcheslav Gurev; Changhoan Kim; John Magerlein; Matthias Reumann; Hui-Fang Wen; John Jeremy Rice
Journal:  Comput Methods Biomech Biomed Engin       Date:  2013-06-04       Impact factor: 1.763

Review 4.  Activation of cardiac tissue by extracellular electrical shocks: formation of 'secondary sources' at intercellular clefts in monolayers of cultured myocytes.

Authors:  V G Fast; S Rohr; A M Gillis; A G Kléber
Journal:  Circ Res       Date:  1998-02-23       Impact factor: 17.367

5.  Length of excitation wave and susceptibility to reentrant atrial arrhythmias in normal conscious dogs.

Authors:  P L Rensma; M A Allessie; W J Lammers; F I Bonke; M J Schalij
Journal:  Circ Res       Date:  1988-02       Impact factor: 17.367

6.  Mechanistic inquiry into the role of tissue remodeling in fibrotic lesions in human atrial fibrillation.

Authors:  Kathleen S McDowell; Fijoy Vadakkumpadan; Robert Blake; Joshua Blauer; Gernot Plank; Rob S Macleod; Natalia A Trayanova
Journal:  Biophys J       Date:  2013-06-18       Impact factor: 4.033

7.  Automatically generated, anatomically accurate meshes for cardiac electrophysiology problems.

Authors:  Anton J Prassl; Ferdinand Kickinger; Helmut Ahammer; Vicente Grau; Jürgen E Schneider; Ernst Hofer; Edward J Vigmond; Natalia A Trayanova; Gernot Plank
Journal:  IEEE Trans Biomed Eng       Date:  2009-02-06       Impact factor: 4.538

8.  Generation of histo-anatomically representative models of the individual heart: tools and application.

Authors:  Gernot Plank; Rebecca A B Burton; Patrick Hales; Martin Bishop; Tahir Mansoori; Miguel O Bernabeu; Alan Garny; Anton J Prassl; Christian Bollensdorff; Fleur Mason; Fahd Mahmood; Blanca Rodriguez; Vicente Grau; Jürgen E Schneider; David Gavaghan; Peter Kohl
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2009-06-13       Impact factor: 4.226

9.  Investigating the role of the coronary vasculature in the mechanisms of defibrillation.

Authors:  Martin J Bishop; Gernot Plank; Edward Vigmond
Journal:  Circ Arrhythm Electrophysiol       Date:  2011-12-08

10.  Development of an anatomically detailed MRI-derived rabbit ventricular model and assessment of its impact on simulations of electrophysiological function.

Authors:  Martin J Bishop; Gernot Plank; Rebecca A B Burton; Jürgen E Schneider; David J Gavaghan; Vicente Grau; Peter Kohl
Journal:  Am J Physiol Heart Circ Physiol       Date:  2009-11-20       Impact factor: 4.733

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  20 in total

1.  Patient-derived models link re-entrant driver localization in atrial fibrillation to fibrosis spatial pattern.

Authors:  Sohail Zahid; Hubert Cochet; Patrick M Boyle; Erica L Schwarz; Kaitlyn N Whyte; Edward J Vigmond; Rémi Dubois; Mélèze Hocini; Michel Haïssaguerre; Pierre Jaïs; Natalia A Trayanova
Journal:  Cardiovasc Res       Date:  2016-04-07       Impact factor: 10.787

2.  Modeling dynamics in diseased cardiac tissue: Impact of model choice.

Authors:  Tanmay A Gokhale; Eli Medvescek; Craig S Henriquez
Journal:  Chaos       Date:  2017-09       Impact factor: 3.642

3.  Modelling methodology of atrial fibrosis affects rotor dynamics and electrograms.

Authors:  Caroline H Roney; Jason D Bayer; Sohail Zahid; Marianna Meo; Patrick M J Boyle; Natalia A Trayanova; Michel Haïssaguerre; Rémi Dubois; Hubert Cochet; Edward J Vigmond
Journal:  Europace       Date:  2016-12       Impact factor: 5.214

4.  Fractional diffusion models of cardiac electrical propagation: role of structural heterogeneity in dispersion of repolarization.

Authors:  Alfonso Bueno-Orovio; David Kay; Vicente Grau; Blanca Rodriguez; Kevin Burrage
Journal:  J R Soc Interface       Date:  2014-08-06       Impact factor: 4.118

5.  Optogenetics-enabled assessment of viral gene and cell therapy for restoration of cardiac excitability.

Authors:  Christina M Ambrosi; Patrick M Boyle; Kay Chen; Natalia A Trayanova; Emilia Entcheva
Journal:  Sci Rep       Date:  2015-12-01       Impact factor: 4.379

6.  Reentry and Ectopic Pacemakers Emerge in a Three-Dimensional Model for a Slab of Cardiac Tissue with Diffuse Microfibrosis near the Percolation Threshold.

Authors:  Sergio Alonso; Rodrigo Weber Dos Santos; Markus Bär
Journal:  PLoS One       Date:  2016-11-22       Impact factor: 3.240

7.  Bidomain Predictions of Virtual Electrode-Induced Make and Break Excitations around Blood Vessels.

Authors:  Adam J Connolly; Edward Vigmond; Martin J Bishop
Journal:  Front Bioeng Biotechnol       Date:  2017-03-27

8.  Variability in pulmonary vein electrophysiology and fibrosis determines arrhythmia susceptibility and dynamics.

Authors:  Caroline H Roney; Jason D Bayer; Hubert Cochet; Marianna Meo; Rémi Dubois; Pierre Jaïs; Edward J Vigmond
Journal:  PLoS Comput Biol       Date:  2018-05-24       Impact factor: 4.475

9.  Fibrosis Microstructure Modulates Reentry in Non-ischemic Dilated Cardiomyopathy: Insights From Imaged Guided 2D Computational Modeling.

Authors:  Gabriel Balaban; Brian P Halliday; Caroline Mendonca Costa; Wenjia Bai; Bradley Porter; Christopher A Rinaldi; Gernot Plank; Daniel Rueckert; Sanjay K Prasad; Martin J Bishop
Journal:  Front Physiol       Date:  2018-12-19       Impact factor: 4.566

10.  Novel Radiofrequency Ablation Strategies for Terminating Atrial Fibrillation in the Left Atrium: A Simulation Study.

Authors:  Jason D Bayer; Caroline H Roney; Ali Pashaei; Pierre Jaïs; Edward J Vigmond
Journal:  Front Physiol       Date:  2016-04-12       Impact factor: 4.566

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