Literature DB >> 2455587

Graphics of RNA secondary structure; towards an object-oriented algorithm.

K Yamamoto1, N Sakurai, H Yoshikura.   

Abstract

We present a new algorithm for the display of RNA secondary structure. The principle of the algorithm is entirely different from those currently in use in that our algorithm is 'object oriented' while current algorithms are 'procedural'. The circular RNA molecule of chrysanthemum stunt viroid was used as input data for demonstrating the operation of the program. The major interest of this method will be found in its potential use in simulation graphics of RNA folding processes.

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Year:  1987        PMID: 2455587     DOI: 10.1093/bioinformatics/3.2.99

Source DB:  PubMed          Journal:  Comput Appl Biosci        ISSN: 0266-7061


  2 in total

1.  RnaViz, a program for the visualisation of RNA secondary structure.

Authors:  P De Rijk; R De Wachter
Journal:  Nucleic Acids Res       Date:  1997-11-15       Impact factor: 16.971

2.  RNA2DMap: A Visual Exploration Tool of the Information in RNA's Higher-Order Structure.

Authors:  Weijia Xu; Ame Wongsa; Jung Lee; Lei Shang; Jamie J Cannone; Robin R Gutell
Journal:  Proceedings (IEEE Int Conf Bioinformatics Biomed)       Date:  2011
  2 in total

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