Literature DB >> 24553071

Complete genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344.

Daniel Wibberg1, Víctor M Luque-Almagro2, Ma Isabel Igeño3, Andreas Bremges1, Ma Dolores Roldán2, Faustino Merchán3, Lara P Sáez2, Ma Isabel Guijo3, Ma Isabel Manso2, Daniel Macías3, Purificación Cabello2, Gracia Becerra3, Ma Isabel Ibáñez2, Ma Isabel Carmona3, Ma María Paz Escribano2, Francisco Castillo2, Alexander Sczyrba1, Conrado Moreno-Vivián2, Rafael Blasco3, Alfred Pühler1, Andreas Schlüter4.   

Abstract

Pseudomonas pseudoalcaligenes CECT5344, a Gram-negative bacterium isolated from the Guadalquir River (Córdoba, Spain), is able to utilize different cyano-derivatives. Here, the complete genome sequence of P. pseudoalcaligenes CECT5344 harboring a 4,686,340bp circular chromosome encoding 4513 genes and featuring a GC-content of 62.34% is reported. Necessarily, remaining gaps in the genome had to be closed by assembly of few long reads obtained from PacBio single molecule real-time sequencing. Here, the first complete genome sequence for the species P. pseudoalcaligenes is presented.
Copyright © 2014 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Bioplastic; Cyanide; Cyanide assimilation; Cyanide resistance; Nitrilase

Mesh:

Substances:

Year:  2014        PMID: 24553071     DOI: 10.1016/j.jbiotec.2014.02.004

Source DB:  PubMed          Journal:  J Biotechnol        ISSN: 0168-1656            Impact factor:   3.307


  9 in total

1.  Analysis of Draft Genome Sequence of Pseudomonas sp. QTF5 Reveals Its Benzoic Acid Degradation Ability and Heavy Metal Tolerance.

Authors:  Yang Li; Yi Ren; Nan Jiang
Journal:  Biomed Res Int       Date:  2017-11-15       Impact factor: 3.411

2.  Quantitative proteomic analysis of Pseudomonas pseudoalcaligenes CECT5344 in response to industrial cyanide-containing wastewaters using Liquid Chromatography-Mass Spectrometry/Mass Spectrometry (LC-MS/MS).

Authors:  María Isabel Ibáñez; Purificación Cabello; Víctor Manuel Luque-Almagro; Lara P Sáez; Alfonso Olaya; Verónica Sánchez de Medina; María Dolores Luque de Castro; Conrado Moreno-Vivián; María Dolores Roldán
Journal:  PLoS One       Date:  2017-03-02       Impact factor: 3.240

3.  Assimilation of cyanide and cyano-derivatives by Pseudomonas pseudoalcaligenes CECT5344: from omic approaches to biotechnological applications.

Authors:  Purificación Cabello; Víctor M Luque-Almagro; Alfonso Olaya-Abril; Lara P Sáez; Conrado Moreno-Vivián; M Dolores Roldán
Journal:  FEMS Microbiol Lett       Date:  2018-03-01       Impact factor: 2.742

4.  Putative small RNAs controlling detoxification of industrial cyanide-containing wastewaters by Pseudomonas pseudoalcaligenes CECT5344.

Authors:  Alfonso Olaya-Abril; Víctor Manuel Luque-Almagro; María Dolores Pérez; Cristina María López; Francisco Amil; Purificación Cabello; Lara Paloma Sáez; Conrado Moreno-Vivián; María Dolores Roldán
Journal:  PLoS One       Date:  2019-02-08       Impact factor: 3.240

5.  Role of the Dihydrodipicolinate Synthase DapA1 on Iron Homeostasis During Cyanide Assimilation by the Alkaliphilic Bacterium Pseudomonas pseudoalcaligenes CECT5344.

Authors:  Alfonso Olaya-Abril; María Dolores Pérez; Purificación Cabello; Diego Martignetti; Lara Paloma Sáez; Víctor Manuel Luque-Almagro; Conrado Moreno-Vivián; María Dolores Roldán
Journal:  Front Microbiol       Date:  2020-01-23       Impact factor: 5.640

6.  New evolving strategies revealed by transcriptomic analysis of a fur- mutant of the cyanotrophic bacterium Pseudomonas pseudoalcaligenes CECT 5344.

Authors:  Gracia Becerra; María Isabel Igeño; Faustino Merchán; Rubén Sánchez-Clemente; Rafael Blasco
Journal:  Microb Biotechnol       Date:  2019-04-21       Impact factor: 5.813

7.  Complete Genome Sequence of Acinetobacter baumannii CIP 70.10, a Susceptible Reference Strain for Comparative Genome Analyses.

Authors:  Thomas Krahn; Daniel Wibberg; Irena Maus; Anika Winkler; Alfred Pühler; Laurent Poirel; Andreas Schlüter
Journal:  Genome Announc       Date:  2015-07-30

8.  Pseudomonas pseudoalcaligenes CECT5344, a cyanide-degrading bacterium with by-product (polyhydroxyalkanoates) formation capacity.

Authors:  Isabel Manso Cobos; María Isabel Ibáñez García; Fernando de la Peña Moreno; Lara Paloma Sáez Melero; Víctor Manuel Luque-Almagro; Francisco Castillo Rodríguez; María Dolores Roldán Ruiz; María Auxiliadora Prieto Jiménez; Conrado Moreno Vivián
Journal:  Microb Cell Fact       Date:  2015-06-10       Impact factor: 5.328

9.  From sequence to function: a new workflow for nitrilase identification.

Authors:  Richard Egelkamp; Ines Friedrich; Robert Hertel; Rolf Daniel
Journal:  Appl Microbiol Biotechnol       Date:  2020-04-14       Impact factor: 4.813

  9 in total

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