Literature DB >> 24550073

Evaluation of rice promoters conferring pollen-specific expression in a heterologous system, Arabidopsis.

Moe Moe Oo1, Hyun-Kyung Bae, Tien Dung Nguyen, Sunok Moon, Sung Aeong Oh, Jeong Hoe Kim, Moon-Soo Soh, Jong Tae Song, Ki-Hong Jung, Soon Ki Park.   

Abstract

Promoters can direct gene expression specifically to targeted tissues or cells. Effective with both crop species and model plant systems, these tools can help researchers overcome the practical obstacles associated with transgenic protocols. Here, we identified promoters that allow one to target the manipulation of gene expression during pollen development. Utilizing published transcriptomic databases for rice, we investigated the promoter activity of selected genes in Arabidopsis. From various microarray datasets, including those for anthers and pollen grains at different developmental stages, we selected nine candidate genes that showed high levels of expression in the late stages of rice pollen development. We named these Oryza sativa late pollen-specific genes. Their promoter regions contained various cis-acting elements that could be responsible for anther-/pollen-specific expression. Promoter::GUS-GFP reporters were constructed and introduced into Arabidopsis plants. Histochemical GUS staining revealed that six of the nine rice promoters conferred strong GUS expression that was restricted to the anthers in Arabidopsis. Further analysis showed that although the GUS signals were not detected at the unicellular stage, they strengthened in the bicellular or tricellular stages, peaking at the mature pollen stage. This paralleled their transcriptomic profiles in rice. Based on our results, we proposed that these six rice promoters, which are active in the late stages of pollen formation in the dicot Arabidopsis, can aid molecular breeders in generating new varieties of a monocot plant, rice.

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Year:  2014        PMID: 24550073     DOI: 10.1007/s00497-014-0239-x

Source DB:  PubMed          Journal:  Plant Reprod        ISSN: 2194-7953            Impact factor:   3.767


  55 in total

1.  Arabidopsis ARR1 and ARR2 response regulators operate as transcriptional activators.

Authors:  H Sakai; T Aoyama; A Oka
Journal:  Plant J       Date:  2000-12       Impact factor: 6.417

2.  Pollen-specific expression of Oryza sativa indica pollen allergen gene (OSIPA) promoter in rice and Arabidopsis transgenic systems.

Authors:  L Swapna; R Khurana; S Vijaya Kumar; A K Tyagi; K V Rao
Journal:  Mol Biotechnol       Date:  2011-05       Impact factor: 2.695

3.  Early infection of scutellum tissue with Agrobacterium allows high-speed transformation of rice.

Authors:  Seiichi Toki; Naho Hara; Kazuko Ono; Haruko Onodera; Akemi Tagiri; Seibi Oka; Hiroshi Tanaka
Journal:  Plant J       Date:  2006-09       Impact factor: 6.417

4.  Promoters of two anther-specific genes confer organ-specific gene expression in a stage-specific manner in transgenic systems.

Authors:  Vikrant Gupta; Reema Khurana; Akhilesh K Tyagi
Journal:  Plant Cell Rep       Date:  2007-07-28       Impact factor: 4.570

Review 5.  Transformation of rice mediated by Agrobacterium tumefaciens.

Authors:  Y Hiei; T Komari; T Kubo
Journal:  Plant Mol Biol       Date:  1997-09       Impact factor: 4.076

6.  Isolation and expression of an anther-specific gene from tomato.

Authors:  D Twell; R Wing; J Yamaguchi; S McCormick
Journal:  Mol Gen Genet       Date:  1989-06

7.  Transcriptome-based examination of putative pollen allergens of rice (Oryza sativa ssp. japonica).

Authors:  Scott D Russell; Prem L Bhalla; Mohan B Singh
Journal:  Mol Plant       Date:  2008-07-21       Impact factor: 13.164

8.  Elaborate spatial patterning of cell-wall PME and PMEI at the pollen tube tip involves PMEI endocytosis, and reflects the distribution of esterified and de-esterified pectins.

Authors:  Nina Röckel; Sebastian Wolf; Benedikt Kost; Thomas Rausch; Steffen Greiner
Journal:  Plant J       Date:  2007-10-29       Impact factor: 6.417

9.  Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis.

Authors:  Yi Wang; Wen-Zheng Zhang; Lian-Fen Song; Jun-Jie Zou; Zhen Su; Wei-Hua Wu
Journal:  Plant Physiol       Date:  2008-09-05       Impact factor: 8.340

10.  Analysis of anther transcriptomes to identify genes contributing to meiosis and male gametophyte development in rice.

Authors:  Priyanka Deveshwar; William D Bovill; Rita Sharma; Jason A Able; Sanjay Kapoor
Journal:  BMC Plant Biol       Date:  2011-05-09       Impact factor: 4.215

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  16 in total

1.  Identification of cis-elements and evaluation of upstream regulatory region of a rice anther-specific gene, OSIPP3, conferring pollen-specific expression in Oryza sativa (L.) ssp. indica.

Authors:  P Manimaran; M Raghurami Reddy; T Bhaskar Rao; Satendra K Mangrauthia; R M Sundaram; S M Balachandran
Journal:  Plant Reprod       Date:  2015-06-17       Impact factor: 3.767

2.  Horizontal gene transfer is more frequent with increased heterotrophy and contributes to parasite adaptation.

Authors:  Zhenzhen Yang; Yeting Zhang; Eric K Wafula; Loren A Honaas; Paula E Ralph; Sam Jones; Christopher R Clarke; Siming Liu; Chun Su; Huiting Zhang; Naomi S Altman; Stephan C Schuster; Michael P Timko; John I Yoder; James H Westwood; Claude W dePamphilis
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-24       Impact factor: 11.205

Review 3.  Bioinformatics resources for pollen.

Authors:  Luca Ambrosino; Hamed Bostan; Valentino Ruggieri; Maria Luisa Chiusano
Journal:  Plant Reprod       Date:  2016-06-08       Impact factor: 3.767

4.  Genome-wide identification and analysis of rice genes preferentially expressed in pollen at an early developmental stage.

Authors:  Tien Dung Nguyen; Sunok Moon; Van Ngoc Tuyet Nguyen; Yunsil Gho; Anil Kumar Nalini Chandran; Moon-Soo Soh; Jong Tae Song; Gynheung An; Sung Aeong Oh; Soon Ki Park; Ki-Hong Jung
Journal:  Plant Mol Biol       Date:  2016-06-29       Impact factor: 4.076

5.  Transcriptional silencing of heterologous anther promoters in maize: a genetic method to replace detasseling for seed production.

Authors:  A Mark Cigan; Kristin Haug-Collet; Joshua Clapp
Journal:  Plant Reprod       Date:  2014-06-26       Impact factor: 3.767

6.  Application of rice microspore-preferred promoters to manipulate early pollen development in Arabidopsis: a heterologous system.

Authors:  Tien Dung Nguyen; Sunok Moon; Moe Moe Oo; Rupesh Tayade; Moon-Soo Soh; Jong Tae Song; Sung Aeong Oh; Ki Hong Jung; Soon Ki Park
Journal:  Plant Reprod       Date:  2016-10-31       Impact factor: 3.767

7.  Sequence and functional analysis of MIR319 promoter homologs from Brassica juncea reveals regulatory diversification and altered expression under stress.

Authors:  Gauri Arora Nee Joshi; Chetan Chauhan; Sandip Das
Journal:  Mol Genet Genomics       Date:  2021-04-02       Impact factor: 3.291

8.  A Rapid Pipeline for Pollen- and Anther-Specific Gene Discovery Based on Transcriptome Profiling Analysis of Maize Tissues.

Authors:  Yannan Shi; Yao Li; Yongchao Guo; Eli James Borrego; Zhengyi Wei; Hong Ren; Zhengqiang Ma; Yuanxin Yan
Journal:  Int J Mol Sci       Date:  2021-06-26       Impact factor: 5.923

Review 9.  A decade of pollen transcriptomics.

Authors:  Nicholas Rutley; David Twell
Journal:  Plant Reprod       Date:  2015-03-12       Impact factor: 3.767

10.  A novel binary T-vector with the GFP reporter gene for promoter characterization.

Authors:  Shu-Ye Jiang; Jeevanandam Vanitha; Yanan Bai; Srinivasan Ramachandran
Journal:  PLoS One       Date:  2014-09-08       Impact factor: 3.240

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