Literature DB >> 2453844

Close relationship between non-viral retroposons in Drosophila melanogaster.

P P Di Nocera1.   

Abstract

G elements constitute one of the several moderately repeated DNA families of the Drosophila melanogaster genome. G elements lack terminal repetitions and structurally resemble mammalian processed pseudogenes because they terminate at one end in oligo-A tracts of variable length. G elements are mostly interspersed in the chromocentric heterochromatin with other repeated DNA sequences. Nucleotide sequence analysis of G3A, a family member inserted in a non-nucleolar rDNA unit, shows that functional G elements might have coding capacity for two polypeptides; one has homology to reverse transcriptases, the other is reminiscent of RNA binding proteins derived from the cleavage of retroviral gag polyproteins. Functionally related polypeptides are similarly encoded by members of two other Drosophila repeated DNA families, the F elements and the I factors. The similarity in structural organization and the relatedness of their potential gene products favors the hypothesis that G, F, and I sequences derive from a common ancestor and result from processes based on the reverse transcription of RNA intermediates that probably differ markedly from those ensuring the maintenance and dispersion of copia-like elements.

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Year:  1988        PMID: 2453844      PMCID: PMC336573          DOI: 10.1093/nar/16.9.4041

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  39 in total

Review 1.  The origin and evolution of retroposons.

Authors:  J H Rogers
Journal:  Int Rev Cytol       Date:  1985

Review 2.  Pseudogenes.

Authors:  C D Wilde
Journal:  CRC Crit Rev Biochem       Date:  1986

3.  L1 family of repetitive DNA sequences in primates may be derived from a sequence encoding a reverse transcriptase-related protein.

Authors:  M Hattori; S Kuhara; O Takenaka; Y Sakaki
Journal:  Nature       Date:  1986 Jun 5-11       Impact factor: 49.962

4.  Dideoxy sequencing method using denatured plasmid templates.

Authors:  M Hattori; Y Sakaki
Journal:  Anal Biochem       Date:  1986-02-01       Impact factor: 3.365

5.  Nucleotide sequence of Rous sarcoma virus.

Authors:  D E Schwartz; R Tizard; W Gilbert
Journal:  Cell       Date:  1983-03       Impact factor: 41.582

6.  Rapid similarity searches of nucleic acid and protein data banks.

Authors:  W J Wilbur; D J Lipman
Journal:  Proc Natl Acad Sci U S A       Date:  1983-02       Impact factor: 11.205

7.  Genomic and structural organization of Drosophila melanogaster G elements.

Authors:  P P Di Nocera; F Graziani; G Lavorgna
Journal:  Nucleic Acids Res       Date:  1986-01-24       Impact factor: 16.971

8.  The LINE-1 DNA sequences in four mammalian orders predict proteins that conserve homologies to retrovirus proteins.

Authors:  T Fanning; M Singer
Journal:  Nucleic Acids Res       Date:  1987-03-11       Impact factor: 16.971

9.  A family of oligo-adenylate-terminated transposable sequences in Drosophila melanogaster.

Authors:  P P Di Nocera; M E Digan; I B Dawid
Journal:  J Mol Biol       Date:  1983-08-25       Impact factor: 5.469

10.  The nature of unstable insertion mutations and reversions in the locus cut of Drosophila melanogaster: molecular mechanism of transposition memory.

Authors:  L J Mizrokhi; L A Obolenkova; A F Priimägi; Y V Ilyin; T I Gerasimova; G P Georgiev
Journal:  EMBO J       Date:  1985-12-30       Impact factor: 11.598

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  32 in total

1.  The downstream promoter element DPE appears to be as widely used as the TATA box in Drosophila core promoters.

Authors:  A K Kutach; J T Kadonaga
Journal:  Mol Cell Biol       Date:  2000-07       Impact factor: 4.272

2.  HeT-A, a transposable element specifically involved in "healing" broken chromosome ends in Drosophila melanogaster.

Authors:  H Biessmann; K Valgeirsdottir; A Lofsky; C Chin; B Ginther; R W Levis; M L Pardue
Journal:  Mol Cell Biol       Date:  1992-09       Impact factor: 4.272

3.  A LINE-like transposable element in Drosophila, the I factor, encodes a protein with properties similar to those of retroviral nucleocapsids.

Authors:  A Dawson; E Hartswood; T Paterson; D J Finnegan
Journal:  EMBO J       Date:  1997-07-16       Impact factor: 11.598

4.  A retrotransposable element from the mosquito Anopheles gambiae .

Authors:  N J Besansky
Journal:  Mol Cell Biol       Date:  1990-03       Impact factor: 4.272

5.  DNA sequence of the Doc retroposon in the white-one mutant of Drosophila melanogaster and of secondary insertions in the phenotypically altered derivatives white-honey and white-eosin.

Authors:  K O'Hare; M R Alley; T E Cullingford; A Driver; M J Sanderson
Journal:  Mol Gen Genet       Date:  1991-01

6.  A long interspersed repetitive element--the I factor of Drosophila teissieri--is able to transpose in different Drosophila species.

Authors:  P Abad; C Vaury; A Pélisson; M C Chaboissier; I Busseau; A Bucheton
Journal:  Proc Natl Acad Sci U S A       Date:  1989-11       Impact factor: 11.205

7.  The beta heterochromatic sequences flanking the I elements are themselves defective transposable elements.

Authors:  C Vaury; A Bucheton; A Pelisson
Journal:  Chromosoma       Date:  1989-09       Impact factor: 4.316

8.  Structural analysis of Doc transposable elements associated with mutations at the white and suppressor of forked loci of Drosophila melanogaster.

Authors:  A Driver; S F Lacey; T E Cullingford; A Mitchelson; K O'Hare
Journal:  Mol Gen Genet       Date:  1989-12

9.  An abundant LINE-like element amplified in the genome of Lilium speciosum.

Authors:  P R Leeton; D R Smyth
Journal:  Mol Gen Genet       Date:  1993-02

10.  BS a novel LINE-like element in Drosophila melanogaster.

Authors:  A Udomkit; S Forbes; G Dalgleish; D J Finnegan
Journal:  Nucleic Acids Res       Date:  1995-04-25       Impact factor: 16.971

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