Literature DB >> 24532646

An integrated method for quantifying root architecture of field-grown maize.

Jie Wu, Yan Guo.   

Abstract

BACKGROUND AND AIMS: A number of techniques have recently been developed for studying the root system architecture (RSA) of seedlings grown in various media. In contrast, methods for sampling and analysis of the RSA of field-grown plants, particularly for details of the lateral root components, are generally inadequate.
METHODS: An integrated methodology was developed that includes a custom-made root-core sampling system for extracting intact root systems of individual maize plants, a combination of proprietary software and a novel program used for collecting individual RSA information, and software for visualizing the measured individual nodal root architecture. KEY
RESULTS: Example experiments show that large root cores can be sampled, and topological and geometrical structure of field-grown maize root systems can be quantified and reconstructed using this method. Second- and higher order laterals are found to contribute substantially to total root number and length. The length of laterals of distinct orders varies significantly. Abundant higher order laterals can arise from a single first-order lateral, and they concentrate in the proximal axile branching zone.
CONCLUSIONS: The new method allows more meaningful sampling than conventional methods because of its easily opened, wide corer and sampling machinery, and effective analysis of RSA using the software. This provides a novel technique for quantifying RSA of field-grown maize and also provides a unique evaluation of the contribution of lateral roots. The method also offers valuable potential for parameterization of root architectural models.

Entities:  

Mesh:

Year:  2014        PMID: 24532646      PMCID: PMC4156117          DOI: 10.1093/aob/mcu009

Source DB:  PubMed          Journal:  Ann Bot        ISSN: 0305-7364            Impact factor:   4.357


  24 in total

Review 1.  Is it good noise? The role of developmental instability in the shaping of a root system.

Authors:  Brian G Forde
Journal:  J Exp Bot       Date:  2009-09-16       Impact factor: 6.992

Review 2.  Future scenarios for plant phenotyping.

Authors:  Fabio Fiorani; Ulrich Schurr
Journal:  Annu Rev Plant Biol       Date:  2013-02-28       Impact factor: 26.379

3.  RooTrak: automated recovery of three-dimensional plant root architecture in soil from x-ray microcomputed tomography images using visual tracking.

Authors:  Stefan Mairhofer; Susan Zappala; Saoirse R Tracy; Craig Sturrock; Malcolm Bennett; Sacha J Mooney; Tony Pridmore
Journal:  Plant Physiol       Date:  2011-12-21       Impact factor: 8.340

4.  Three-dimensional root phenotyping with a novel imaging and software platform.

Authors:  Randy T Clark; Robert B MacCurdy; Janelle K Jung; Jon E Shaff; Susan R McCouch; Daniel J Aneshansley; Leon V Kochian
Journal:  Plant Physiol       Date:  2011-03-31       Impact factor: 8.340

Review 5.  Quantitative analysis of lateral root development: pitfalls and how to avoid them.

Authors:  Joseph G Dubrovsky; Brian G Forde
Journal:  Plant Cell       Date:  2012-01-06       Impact factor: 11.277

6.  Combined MRI-PET dissects dynamic changes in plant structures and functions.

Authors:  Siegfried Jahnke; Marion I Menzel; Dagmar van Dusschoten; Gerhard W Roeb; Jonas Bühler; Senay Minwuyelet; Peter Blümler; Vicky M Temperton; Thomas Hombach; Matthias Streun; Simone Beer; Maryam Khodaverdi; Karl Ziemons; Heinz H Coenen; Ulrich Schurr
Journal:  Plant J       Date:  2009-04-06       Impact factor: 6.417

7.  High-throughput two-dimensional root system phenotyping platform facilitates genetic analysis of root growth and development.

Authors:  Randy T Clark; Adam N Famoso; Keyan Zhao; Jon E Shaff; Eric J Craft; Carlos D Bustamante; Susan R McCouch; Daniel J Aneshansley; Leon V Kochian
Journal:  Plant Cell Environ       Date:  2012-09-03       Impact factor: 7.228

Review 8.  Genetic dissection of root formation in maize (Zea mays) reveals root-type specific developmental programmes.

Authors:  Frank Hochholdinger; Katrin Woll; Michaela Sauer; Diana Dembinsky
Journal:  Ann Bot       Date:  2004-02-23       Impact factor: 4.357

9.  Root system architecture: insights from Arabidopsis and cereal crops.

Authors:  Stephanie Smith; Ive De Smet
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-06-05       Impact factor: 6.237

Review 10.  Plastic plants and patchy soils.

Authors:  A Hodge
Journal:  J Exp Bot       Date:  2005-09-19       Impact factor: 6.992

View more
  13 in total

1.  Relationships between root diameter, root length and root branching along lateral roots in adult, field-grown maize.

Authors:  Qian Wu; Loïc Pagès; Jie Wu
Journal:  Ann Bot       Date:  2016-01-07       Impact factor: 4.357

2.  Functional-structural plant models: a growing paradigm for plant studies.

Authors:  Risto Sievänen; Christophe Godin; Theodore M DeJong; Eero Nikinmaa
Journal:  Ann Bot       Date:  2014-09       Impact factor: 4.357

3.  Branching patterns of root systems: comparison of monocotyledonous and dicotyledonous species.

Authors:  Loïc Pagès
Journal:  Ann Bot       Date:  2016-09-15       Impact factor: 4.357

4.  Optimizing soil-coring strategies to quantify root-length-density distribution in field-grown maize: virtual coring trials using 3-D root architecture models.

Authors:  Qian Wu; Jie Wu; Bangyou Zheng; Yan Guo
Journal:  Ann Bot       Date:  2018-04-18       Impact factor: 4.357

5.  Computed tomography scanning can monitor the effects of soil medium on root system development: an example of salt stress in corn.

Authors:  Sowmyalakshmi Subramanian; Liwen Han; Pierre Dutilleul; Donald L Smith
Journal:  Front Plant Sci       Date:  2015-04-28       Impact factor: 5.753

6.  Intensive field phenotyping of maize (Zea mays L.) root crowns identifies phenes and phene integration associated with plant growth and nitrogen acquisition.

Authors:  Larry M York; Jonathan P Lynch
Journal:  J Exp Bot       Date:  2015-06-03       Impact factor: 6.992

7.  Physiological mechanisms contributing to the QTL qDTY3.2 effects on improved performance of rice Moroberekan x Swarna BC2F3:4 lines under drought.

Authors:  Alexandre Grondin; Shalabh Dixit; Rolando Torres; Challa Venkateshwarlu; Eric Rogers; Thomas Mitchell-Olds; Philip N Benfey; Arvind Kumar; Amelia Henry
Journal:  Rice (N Y)       Date:  2018-07-31       Impact factor: 4.783

8.  DNA based diagnostic for the quantification of sugarcane root DNA in the field.

Authors:  J S Pierre; D Giblot-Ducray; A C McKay; D M Hartley; J M Perroux; A L Rae
Journal:  Sci Rep       Date:  2018-11-13       Impact factor: 4.379

9.  Backhoe-assisted monolith method for plant root phenotyping under upland conditions.

Authors:  Shota Teramoto; Yuka Kitomi; Ryo Nishijima; Satoko Takayasu; Natsuko Maruyama; Yusaku Uga
Journal:  Breed Sci       Date:  2019-07-10       Impact factor: 2.086

10.  Using clear plastic CD cases as low-cost mini-rhizotrons to phenotype root traits.

Authors:  Steven T Cassidy; Audrey A Burr; Rachel A Reeb; Ana L Melero Pardo; Kamron D Woods; Corlett W Wood
Journal:  Appl Plant Sci       Date:  2020-04-19       Impact factor: 1.936

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.