Literature DB >> 24530534

Fine-tuned broad binding capability of human lipocalin-type prostaglandin D synthase for various small lipophilic ligands.

Satoshi Kume1, Young-Ho Lee2, Masatoshi Nakatsuji3, Yoshiaki Teraoka3, Keisuke Yamaguchi3, Yuji Goto2, Takashi Inui4.   

Abstract

The hydrophobic cavity of lipocalin-type prostaglandin D synthase (L-PGDS) has been suggested to accommodate various lipophilic ligands through hydrophobic effects, but its energetic origin remains unknown. We characterized 18 buffer-independent binding systems between human L-PGDS and lipophilic ligands using isothermal titration calorimetry. Although the classical hydrophobic effect was mostly detected, all complex formations were driven by favorable enthalpic gains. Gibbs energy changes strongly correlated with the number of hydrogen bond acceptors of ligand. Thus, the broad binding capability of L-PGDS for ligands should be viewed as hydrophilic interactions delicately tuned by enthalpy-entropy compensation using combined effects of hydrophilic and hydrophobic interactions.
Copyright © 2014 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Binding thermodynamic; Driving force; Enthalpy–entropy compensation; Hydrophobic effect; Isothermal titration calorimetry; Lipocalin-type prostaglandin D synthase; Protein–ligand interaction

Mesh:

Substances:

Year:  2014        PMID: 24530534     DOI: 10.1016/j.febslet.2014.02.001

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  2 in total

1.  Amyloid β chaperone - lipocalin-type prostaglandin D synthase acts as a peroxidase in the presence of heme.

Authors:  Margaret Phillips; Bhuvaneswari Kannaian; Justin Ng Tze Yang; Ralf Kather; Mu Yuguang; Jeffrey R Harmer; Konstantin Pervushin
Journal:  Biochem J       Date:  2020-04-17       Impact factor: 3.857

Review 2.  Molecular mechanisms of amyloid disaggregation.

Authors:  Kimberly Jia Yi Low; Anandalakshmi Venkatraman; Jodhbir S Mehta; Konstantin Pervushin
Journal:  J Adv Res       Date:  2021-05-20       Impact factor: 10.479

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.