Literature DB >> 24530126

Life of psi: how full-length HIV-1 RNAs become packaged genomes in the viral particles.

Malika Kuzembayeva1, Kari Dilley1, Luca Sardo1, Wei-Shau Hu2.   

Abstract

As a member of the retrovirus family, HIV-1 packages its RNA genome into particles and replicates through a DNA intermediate that integrates into the host cellular genome. The multiple genes encoded by HIV-1 are expressed from the same promoter and their expression is regulated by splicing and ribosomal frameshift. The full-length HIV-1 RNA plays a central role in viral replication as it serves as the genome in the progeny virus and is used as the template for Gag and GagPol translation. In this review, we summarize findings that contribute to our current understanding of how full-length RNA is expressed and transported, cis- and trans-acting elements important for RNA packaging, the locations and timing of RNA:RNA and RNA:Gag interactions, and the processes required for this RNA to be packaged into viral particles. Published by Elsevier Inc.

Entities:  

Keywords:  Full-length RNA; Gag; HIV-1; RNA dimerization; RNA export; RNA packaging; RNA transcription and processing; RRE; Retrovirus; Rev; Virus assembly

Mesh:

Substances:

Year:  2014        PMID: 24530126      PMCID: PMC6258065          DOI: 10.1016/j.virol.2014.01.019

Source DB:  PubMed          Journal:  Virology        ISSN: 0042-6822            Impact factor:   3.616


  157 in total

1.  Genetic consequences of packaging two RNA genomes in one retroviral particle: pseudodiploidy and high rate of genetic recombination.

Authors:  W S Hu; H M Temin
Journal:  Proc Natl Acad Sci U S A       Date:  1990-02       Impact factor: 11.205

2.  High efficiency of HIV-1 genomic RNA packaging and heterozygote formation revealed by single virion analysis.

Authors:  Jianbo Chen; Olga Nikolaitchik; Jatinder Singh; Andrew Wright; Craig E Bencsics; John M Coffin; Na Ni; Stephen Lockett; Vinay K Pathak; Wei-Shau Hu
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-23       Impact factor: 11.205

3.  Deficiency of 60 to 70S RNA in murine leukemia virus particles assembled in cells treated with actinomycin D.

Authors:  J G Levin; P M Grimley; J M Ramseur; I K Berezesky
Journal:  J Virol       Date:  1974-07       Impact factor: 5.103

4.  A DEAD box protein facilitates HIV-1 replication as a cellular co-factor of Rev.

Authors:  Jianhua Fang; Satoshi Kubota; Bin Yang; Naiming Zhou; Hui Zhang; Roseline Godbout; Roger J Pomerantz
Journal:  Virology       Date:  2004-12-20       Impact factor: 3.616

5.  Comparison of viral genomic RNA sorting mechanisms in human immunodeficiency virus type 1 (HIV-1), HIV-2, and Moloney murine leukemia virus.

Authors:  N Dorman; A Lever
Journal:  J Virol       Date:  2000-12       Impact factor: 5.103

6.  Mode of dimerization of HIV-1 genomic RNA.

Authors:  G Awang; D Sen
Journal:  Biochemistry       Date:  1993-10-26       Impact factor: 3.162

7.  Leptomycin B inhibits equine infectious anemia virus Rev and feline immunodeficiency virus rev function but not the function of the hepatitis B virus posttranscriptional regulatory element.

Authors:  G C Otero; M E Harris; J E Donello; T J Hope
Journal:  J Virol       Date:  1998-09       Impact factor: 5.103

8.  Minimal region sufficient for genome dimerization in the human immunodeficiency virus type 1 virion and its potential roles in the early stages of viral replication.

Authors:  Jun-Ichi Sakuragi; Sayuri Sakuragi; Tatsuo Shioda
Journal:  J Virol       Date:  2007-05-16       Impact factor: 5.103

9.  Evolution of a species-specific determinant within human CRM1 that regulates the post-transcriptional phases of HIV-1 replication.

Authors:  Nathan M Sherer; Chad M Swanson; Stéphane Hué; Roland G Roberts; Julien R C Bergeron; Michael H Malim
Journal:  PLoS Pathog       Date:  2011-11-17       Impact factor: 6.823

10.  Probing the HIV-1 genomic RNA trafficking pathway and dimerization by genetic recombination and single virion analyses.

Authors:  Michael D Moore; Olga A Nikolaitchik; Jianbo Chen; Marie-Louise Hammarskjöld; David Rekosh; Wei-Shau Hu
Journal:  PLoS Pathog       Date:  2009-10-16       Impact factor: 6.823

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  76 in total

1.  Dynamics of HIV-1 RNA Near the Plasma Membrane during Virus Assembly.

Authors:  Luca Sardo; Steven C Hatch; Jianbo Chen; Olga Nikolaitchik; Ryan C Burdick; De Chen; Christopher J Westlake; Stephen Lockett; Vinay K Pathak; Wei-Shau Hu
Journal:  J Virol       Date:  2015-08-19       Impact factor: 5.103

2.  Structural basis for transcriptional start site control of HIV-1 RNA fate.

Authors:  Joshua D Brown; Siarhei Kharytonchyk; Issac Chaudry; Aishwarya S Iyer; Hannah Carter; Ghazal Becker; Yash Desai; Lindsay Glang; Seung H Choi; Karndeep Singh; Michael W Lopresti; Matthew Orellana; Tatiana Rodriguez; Ubiomo Oboh; Jana Hijji; Frances Grace Ghinger; Kailan Stewart; Dillion Francis; Bryce Edwards; Patrick Chen; David A Case; Alice Telesnitsky; Michael F Summers
Journal:  Science       Date:  2020-04-24       Impact factor: 47.728

3.  Human T-cell leukemia virus type 1 Gag domains have distinct RNA-binding specificities with implications for RNA packaging and dimerization.

Authors:  Weixin Wu; Joshua Hatterschide; Yu-Ci Syu; William A Cantara; Ruth J Blower; Heather M Hanson; Louis M Mansky; Karin Musier-Forsyth
Journal:  J Biol Chem       Date:  2018-09-14       Impact factor: 5.157

Review 4.  How HIV-1 Gag assembles in cells: Putting together pieces of the puzzle.

Authors:  Jaisri R Lingappa; Jonathan C Reed; Motoko Tanaka; Kasana Chutiraka; Bridget A Robinson
Journal:  Virus Res       Date:  2014-07-24       Impact factor: 3.303

5.  NMR detection of intermolecular interaction sites in the dimeric 5'-leader of the HIV-1 genome.

Authors:  Sarah C Keane; Verna Van; Heather M Frank; Carly A Sciandra; Sayo McCowin; Justin Santos; Xiao Heng; Michael F Summers
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-10       Impact factor: 11.205

6.  HIV-1 Pr55Gag binds genomic and spliced RNAs with different affinity and stoichiometry.

Authors:  Serena Bernacchi; Ekram W Abd El-Wahab; Noé Dubois; Marcel Hijnen; Redmond P Smyth; Johnson Mak; Roland Marquet; Jean-Christophe Paillart
Journal:  RNA Biol       Date:  2016-11-14       Impact factor: 4.652

7.  Interactions between HIV-1 Gag and Viral RNA Genome Enhance Virion Assembly.

Authors:  Kari A Dilley; Olga A Nikolaitchik; Andrea Galli; Ryan C Burdick; Louis Levine; Kelvin Li; Alan Rein; Vinay K Pathak; Wei-Shau Hu
Journal:  J Virol       Date:  2017-07-27       Impact factor: 5.103

8.  The C-terminal p6 domain of the HIV-1 Pr55Gag precursor is required for specific binding to the genomic RNA.

Authors:  Noé Dubois; Keith K Khoo; Shannon Ghossein; Tanja Seissler; Philippe Wolff; William J McKinstry; Johnson Mak; Jean-Christophe Paillart; Roland Marquet; Serena Bernacchi
Journal:  RNA Biol       Date:  2018-08-04       Impact factor: 4.652

9.  Structure of the 30 kDa HIV-1 RNA Dimerization Signal by a Hybrid Cryo-EM, NMR, and Molecular Dynamics Approach.

Authors:  Kaiming Zhang; Sarah C Keane; Zhaoming Su; Rossitza N Irobalieva; Muyuan Chen; Verna Van; Carly A Sciandra; Jan Marchant; Xiao Heng; Michael F Schmid; David A Case; Steven J Ludtke; Michael F Summers; Wah Chiu
Journal:  Structure       Date:  2018-02-02       Impact factor: 5.006

Review 10.  HIV-1 Gag as an Antiviral Target: Development of Assembly and Maturation Inhibitors.

Authors:  Paul Spearman
Journal:  Curr Top Med Chem       Date:  2016       Impact factor: 3.295

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