Literature DB >> 24528581

Characterization of 15 STR cannabis loci: nomenclature proposal and SNPSTR haplotypes.

Laura Valverde1, Christian Lischka2, Stefanie Scheiper2, Johanna Nedele2, Rachel Challis2, Marian M de Pancorbo3, Heidi Pfeiffer2, Stephan Köhnemann4.   

Abstract

The standardization of methods for individualizing Cannabis sativa plants could offer new possibilities in the investigation of its illegal trade. Here we present the first nomenclature proposal for 15 cannabis STRs, which allows an initial standardization for performing comparisons between laboratories and generating genotype databases. Several alleles of the 15 STR loci have been sequenced. This has revealed that not all the STR loci are equally suitable for the individualization purposes. Moreover, several nucleotide variations have been detected both inside the repeat structure and/or in the flanking region. All the different SNPSTR haplotypes are presented and compared with the previous sequence raw data of the 15 STR loci. The SNPSTR data could considerably increase the informative value of the STRs, which could be very useful in complex cases.
Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.

Entities:  

Keywords:  Cannabis; Forensic genetics; Nomenclature; SNPSTR haplotype; STR

Mesh:

Year:  2013        PMID: 24528581     DOI: 10.1016/j.fsigen.2013.11.001

Source DB:  PubMed          Journal:  Forensic Sci Int Genet        ISSN: 1872-4973            Impact factor:   4.882


  6 in total

1.  13-loci STR multiplex system for Brazilian seized samples of marijuana: individualization and origin differentiation.

Authors:  Mauro Sander Fett; Roberta Fogliatto Mariot; Eduardo Avila; Clarice Sampaio Alho; Valdir Marcos Stefenon; Flávio Anastácio de Oliveira Camargo
Journal:  Int J Legal Med       Date:  2018-10-15       Impact factor: 2.686

2.  Evaluation of two 13-loci STR multiplex system regarding identification and origin discrimination of Brazilian Cannabis sativa samples.

Authors:  Lucas de Oliveira Pereira Ribeiro; Eduardo Avila; Roberta Fogliatto Mariot; Mauro Sander Fett; Flávio Anastácio de Oliveira Camargo; Clarice Sampaio Alho
Journal:  Int J Legal Med       Date:  2020-06-25       Impact factor: 2.686

3.  Evaluation of a 13-loci STR multiplex system for Cannabis sativa genetic identification.

Authors:  Rachel Houston; Matthew Birck; Sheree Hughes-Stamm; David Gangitano
Journal:  Int J Legal Med       Date:  2015-12-10       Impact factor: 2.686

4.  Broad-Scale Genetic Diversity of Cannabis for Forensic Applications.

Authors:  Christophe Dufresnes; Catherine Jan; Friederike Bienert; Jérôme Goudet; Luca Fumagalli
Journal:  PLoS One       Date:  2017-01-20       Impact factor: 3.240

5.  Development and Validation of a Novel and Fast Detection Method for Cannabis sativa: A 19-Plex Short Tandem Repeat Typing System.

Authors:  Ruocheng Xia; Ruiyang Tao; Yiling Qu; Xiaochun Zhang; Huan Yu; Chunyan Yuan; Suhua Zhang; Chengtao Li
Journal:  Front Plant Sci       Date:  2022-02-28       Impact factor: 5.753

6.  Genetic Evaluation of In Vitro Micropropagated and Regenerated Plants of Cannabis sativa L. Using SSR Molecular Markers.

Authors:  Kostas Ioannidis; Ioanna Tomprou; Vangelis Mitsis; Polyxeni Koropouli
Journal:  Plants (Basel)       Date:  2022-09-29
  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.