Literature DB >> 24528177

Conformational properties of oxazole-amino acids: effect of the intramolecular N-H···N hydrogen bond.

Dawid Siodłak1, Monika Staś, Małgorzata A Broda, Maciej Bujak, Tadeusz Lis.   

Abstract

Oxazole ring occurs in numerous natural peptides, but conformational properties of the amino acid residue containing the oxazole ring in place of the C-terminal amide bond are poorly recognized. A series of model compounds constituted by the oxazole-amino acids occurring in nature, that is, oxazole-alanine (L-Ala-Ozl), oxazole-dehydroalanine (ΔAla-Ozl), and oxazole-dehydrobutyrine ((Z)-ΔAbu-Ozl), was investigated using theoretical calculations supported by FTIR and NMR spectra and single-crystal X-ray diffraction. It was found that the main feature of the studied oxazole-amino acids is the stable conformation β2 with the torsion angles φ and ψ of -150°, -10° for L-Ala-Ozl, -180°, 0° for ΔAla-Ozl, and -120°, 0° for (Z)-ΔAbu-Ozl, respectively. The conformation β2 is stabilized by the intramolecular N-H···N hydrogen bond and predominates in the low polar environment. In the case of the oxazole-dehydroamino acids, the π-electron conjugation that is spread on the oxazole ring and C(α)═C(β) double bond is an additional stabilizing interaction. The tendency to adopt the conformation β2 clearly decreases with increasing the polarity of environment, but still the oxazole-dehydroamino acids are considered to be more rigid and resistant to conformational changes.

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Year:  2014        PMID: 24528177     DOI: 10.1021/jp4121673

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  3 in total

1.  Synthesis of Tetrapeptides Containing Dehydroalanine, Dehydrophenylalanine and Oxazole as Building Blocks for Construction of Foldamers and Bioinspired Catalysts.

Authors:  Paweł Lenartowicz; Maarten Beelen; Maciej Makowski; Weronika Wanat; Błażej Dziuk; Paweł Kafarski
Journal:  Molecules       Date:  2022-04-19       Impact factor: 4.927

2.  Thiazole-amino acids: influence of thiazole ring on conformational properties of amino acid residues.

Authors:  Monika Staś; Małgorzata A Broda; Dawid Siodłak
Journal:  Amino Acids       Date:  2021-04-10       Impact factor: 3.520

3.  Posttranslational chemical installation of azoles into translated peptides.

Authors:  Haruka Tsutsumi; Tomohiro Kuroda; Hiroyuki Kimura; Yuki Goto; Hiroaki Suga
Journal:  Nat Commun       Date:  2021-01-29       Impact factor: 14.919

  3 in total

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