Literature DB >> 24527934

Poisson property of the occurrence of flip-flops in a model membrane.

Noriyoshi Arai1, Takuma Akimoto2, Eiji Yamamoto2, Masato Yasui3, Kenji Yasuoka2.   

Abstract

How do lipid molecules in membranes perform a flip-flop? The flip-flops of lipid molecules play a crucial role in the formation and flexibility of membranes. However, little has been determined about the behavior of flip-flops, either experimentally, or in molecular dynamics simulations. Here, we provide numerical results of the flip-flops of model lipid molecules in a model membrane and investigate the statistical properties, using millisecond-order coarse-grained molecular simulations (dissipative particle dynamics). We find that there are three different ways of flip-flops, which can be clearly characterized by their paths on the free energy surface. Furthermore, we found that the probability of the number of the flip-flops is well fitted by the Poisson distribution, and the probability density function for the inter-occurrence times of flip-flops coincides with that of the forward recurrence times. These results indicate that the occurrence of flip-flops is a Poisson process, which will play an important role in the flexibilities of membranes.

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Year:  2014        PMID: 24527934     DOI: 10.1063/1.4863330

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  4 in total

1.  Multiscale Simulations of Biological Membranes: The Challenge To Understand Biological Phenomena in a Living Substance.

Authors:  Giray Enkavi; Matti Javanainen; Waldemar Kulig; Tomasz Róg; Ilpo Vattulainen
Journal:  Chem Rev       Date:  2019-03-12       Impact factor: 60.622

2.  Measuring bilayer surface energy and curvature in asymmetric droplet interface bilayers.

Authors:  Nathan E Barlow; Halim Kusumaatmaja; Ali Salehi-Reyhani; Nick Brooks; Laura M C Barter; Anthony J Flemming; Oscar Ces
Journal:  J R Soc Interface       Date:  2018-11-21       Impact factor: 4.118

3.  Interactions of Pleckstrin Homology Domains with Membranes: Adding Back the Bilayer via High-Throughput Molecular Dynamics.

Authors:  Eiji Yamamoto; Antreas C Kalli; Kenji Yasuoka; Mark S P Sansom
Journal:  Structure       Date:  2016-07-14       Impact factor: 5.006

4.  Multiscale Simulations Suggest a Mechanism for the Association of the Dok7 PH Domain with PIP-Containing Membranes.

Authors:  Amanda Buyan; Antreas C Kalli; Mark S P Sansom
Journal:  PLoS Comput Biol       Date:  2016-07-26       Impact factor: 4.475

  4 in total

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