| Literature DB >> 24527025 |
Jinglin Wang1, Rong He1, Zhijuan Xin1, Huiling Shen1, Cairong Wang1.
Abstract
In the title compound, C13H11ClN4O3, the phenyl and pyrrolyl ring are linked by an ac-yl-hydrazone (R 2C=N-N-CO-R) group, forming a slightly bent mol-ecule: the dihedral angle subtended by the the phenyl and pyrrolyl rings is 8.46 (12)°. In the crystal, the three-dimensional supra-molecular structure is assembled by N-H⋯O hydrogen bonding. Mol-ecular sheets are formed parallel to (101) in a herringbone arrangement by weak van der Waals inter-actions; weak π-π [centroid-centroid phen-yl-phenyl and pyrrol-yl-pyrrolyl distances of 3.7816 (3) and 3.8946 (2) Å, respectively] inter-actions occur between neighbouring sheets.Entities:
Year: 2013 PMID: 24527025 PMCID: PMC3914118 DOI: 10.1107/S1600536813034119
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H11ClN4O3 | |
| Monoclinic, | Mo |
| Cell parameters from 1539 reflections | |
| θ = 3.0–25.2° | |
| µ = 0.29 mm−1 | |
| β = 95.523 (1)° | |
| Block, yellow | |
| 0.30 × 0.20 × 0.16 mm |
| Bruker SMART 1000 CCD diffractometer | 2452 independent reflections |
| Radiation source: fine-focus sealed tube | 1435 reflections with |
| Graphite monochromator | |
| phi and ω scans | θmax = 25.0°, θmin = 1.5° |
| Absorption correction: multi-scan ( | |
| 6871 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2452 reflections | (Δ/σ)max = 0.001 |
| 191 parameters | Δρmax = 0.23 e Å−3 |
| 0 restraints | Δρmin = −0.33 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.29032 (9) | 1.16858 (8) | 1.00653 (18) | 0.1044 (6) | |
| N1 | 0.14340 (19) | 0.51021 (19) | 1.0868 (3) | 0.0508 (7) | |
| N2 | −0.0430 (2) | 0.5940 (3) | 1.3388 (4) | 0.0712 (9) | |
| N3 | 0.24317 (19) | 0.7725 (2) | 1.0085 (3) | 0.0512 (8) | |
| H3 | 0.2231 | 0.7996 | 1.0964 | 0.061* | |
| N4 | 0.30201 (18) | 0.83156 (19) | 0.9133 (3) | 0.0470 (7) | |
| O1 | 0.24317 (17) | 0.62828 (16) | 0.8366 (3) | 0.0587 (7) | |
| O2 | −0.0656 (2) | 0.6852 (3) | 1.3780 (4) | 0.1057 (12) | |
| O3 | −0.08399 (19) | 0.5122 (3) | 1.3789 (3) | 0.0907 (9) | |
| C1 | 0.2175 (2) | 0.6716 (2) | 0.9618 (4) | 0.0465 (8) | |
| C2 | 0.1506 (2) | 0.6203 (2) | 1.0708 (4) | 0.0451 (8) | |
| C3 | 0.0829 (2) | 0.6674 (3) | 1.1612 (4) | 0.0514 (8) | |
| H3A | 0.0711 | 0.7403 | 1.1715 | 0.062* | |
| C4 | 0.0352 (2) | 0.5839 (3) | 1.2344 (4) | 0.0561 (9) | |
| C5 | 0.0737 (2) | 0.4884 (3) | 1.1897 (4) | 0.0573 (9) | |
| H5 | 0.0554 | 0.4209 | 1.2235 | 0.069* | |
| C6 | 0.2046 (3) | 0.4285 (3) | 1.0169 (5) | 0.0659 (10) | |
| H6A | 0.2708 | 0.4362 | 1.0642 | 0.099* | |
| H6B | 0.2017 | 0.4376 | 0.8992 | 0.099* | |
| H6C | 0.1810 | 0.3586 | 1.0416 | 0.099* | |
| C7 | 0.3117 (2) | 0.9297 (2) | 0.9548 (4) | 0.0483 (8) | |
| H7 | 0.2764 | 0.9569 | 1.0373 | 0.058* | |
| C8 | 0.3779 (2) | 1.0000 (2) | 0.8743 (4) | 0.0467 (8) | |
| C9 | 0.3778 (2) | 1.1102 (2) | 0.8944 (4) | 0.0571 (9) | |
| C10 | 0.4438 (3) | 1.1761 (3) | 0.8256 (5) | 0.0698 (11) | |
| H10 | 0.4413 | 1.2498 | 0.8406 | 0.084* | |
| C11 | 0.5133 (3) | 1.1319 (3) | 0.7348 (5) | 0.0698 (11) | |
| H11 | 0.5587 | 1.1756 | 0.6900 | 0.084* | |
| C12 | 0.5154 (3) | 1.0231 (3) | 0.7108 (5) | 0.0659 (10) | |
| H12 | 0.5620 | 0.9933 | 0.6491 | 0.079* | |
| C13 | 0.4481 (2) | 0.9577 (3) | 0.7784 (4) | 0.0568 (9) | |
| H13 | 0.4497 | 0.8843 | 0.7598 | 0.068* |
| Cl1 | 0.1002 (9) | 0.0517 (6) | 0.1730 (14) | 0.0028 (6) | 0.0731 (9) | −0.0179 (7) |
| N1 | 0.0553 (16) | 0.0427 (14) | 0.0560 (18) | −0.0065 (13) | 0.0130 (13) | 0.0045 (13) |
| N2 | 0.057 (2) | 0.102 (3) | 0.057 (2) | −0.019 (2) | 0.0189 (16) | 0.0023 (19) |
| N3 | 0.0646 (18) | 0.0459 (15) | 0.0477 (17) | −0.0109 (13) | 0.0286 (14) | −0.0042 (12) |
| N4 | 0.0549 (16) | 0.0436 (15) | 0.0455 (16) | −0.0057 (13) | 0.0199 (13) | 0.0025 (11) |
| O1 | 0.0821 (17) | 0.0499 (12) | 0.0490 (14) | −0.0105 (12) | 0.0310 (12) | −0.0064 (11) |
| O2 | 0.088 (2) | 0.121 (3) | 0.117 (3) | −0.010 (2) | 0.056 (2) | −0.027 (2) |
| O3 | 0.0637 (17) | 0.134 (3) | 0.077 (2) | −0.0337 (18) | 0.0193 (14) | 0.0198 (18) |
| C1 | 0.053 (2) | 0.0444 (17) | 0.045 (2) | −0.0027 (15) | 0.0197 (15) | 0.0023 (14) |
| C2 | 0.0476 (18) | 0.0425 (16) | 0.047 (2) | −0.0063 (14) | 0.0123 (15) | −0.0010 (14) |
| C3 | 0.0496 (19) | 0.0530 (18) | 0.054 (2) | −0.0032 (16) | 0.0153 (16) | −0.0007 (16) |
| C4 | 0.0516 (19) | 0.069 (2) | 0.050 (2) | −0.0095 (18) | 0.0160 (16) | 0.0016 (17) |
| C5 | 0.059 (2) | 0.059 (2) | 0.055 (2) | −0.0168 (18) | 0.0113 (17) | 0.0151 (17) |
| C6 | 0.075 (3) | 0.0447 (18) | 0.079 (3) | 0.0036 (18) | 0.014 (2) | 0.0010 (18) |
| C7 | 0.0515 (19) | 0.0442 (18) | 0.053 (2) | −0.0001 (15) | 0.0227 (16) | −0.0005 (15) |
| C8 | 0.0473 (18) | 0.0431 (16) | 0.052 (2) | −0.0039 (15) | 0.0150 (15) | 0.0006 (14) |
| C9 | 0.056 (2) | 0.0442 (18) | 0.074 (3) | −0.0032 (16) | 0.0199 (18) | 0.0008 (17) |
| C10 | 0.068 (2) | 0.0459 (19) | 0.098 (3) | −0.0110 (18) | 0.021 (2) | 0.0092 (19) |
| C11 | 0.061 (2) | 0.076 (3) | 0.074 (3) | −0.013 (2) | 0.016 (2) | 0.018 (2) |
| C12 | 0.063 (2) | 0.075 (3) | 0.064 (3) | −0.002 (2) | 0.0284 (19) | 0.003 (2) |
| C13 | 0.064 (2) | 0.0502 (19) | 0.059 (2) | −0.0029 (17) | 0.0220 (18) | 0.0008 (16) |
| Cl1—C9 | 1.739 (3) | C5—H5 | 0.9300 |
| N1—C5 | 1.359 (4) | C6—H6A | 0.9600 |
| N1—C2 | 1.387 (4) | C6—H6B | 0.9600 |
| N1—C6 | 1.472 (4) | C6—H6C | 0.9600 |
| N2—O3 | 1.227 (4) | C7—C8 | 1.465 (4) |
| N2—O2 | 1.232 (4) | C7—H7 | 0.9300 |
| N2—C4 | 1.439 (4) | C8—C9 | 1.387 (4) |
| N3—C1 | 1.354 (4) | C8—C13 | 1.402 (4) |
| N3—N4 | 1.386 (3) | C9—C10 | 1.383 (5) |
| N3—H3 | 0.8600 | C10—C11 | 1.379 (5) |
| N4—C7 | 1.276 (4) | C10—H10 | 0.9300 |
| O1—C1 | 1.234 (3) | C11—C12 | 1.374 (5) |
| C1—C2 | 1.483 (4) | C11—H11 | 0.9300 |
| C2—C3 | 1.374 (4) | C12—C13 | 1.388 (4) |
| C3—C4 | 1.397 (4) | C12—H12 | 0.9300 |
| C3—H3A | 0.9300 | C13—H13 | 0.9300 |
| C4—C5 | 1.369 (5) | ||
| C5—N1—C2 | 108.5 (3) | N1—C6—H6B | 109.5 |
| C5—N1—C6 | 124.2 (3) | H6A—C6—H6B | 109.5 |
| C2—N1—C6 | 127.1 (2) | N1—C6—H6C | 109.5 |
| O3—N2—O2 | 124.7 (3) | H6A—C6—H6C | 109.5 |
| O3—N2—C4 | 118.2 (4) | H6B—C6—H6C | 109.5 |
| O2—N2—C4 | 117.1 (3) | N4—C7—C8 | 120.8 (3) |
| C1—N3—N4 | 119.4 (2) | N4—C7—H7 | 119.6 |
| C1—N3—H3 | 120.3 | C8—C7—H7 | 119.6 |
| N4—N3—H3 | 120.3 | C9—C8—C13 | 116.7 (3) |
| C7—N4—N3 | 114.6 (2) | C9—C8—C7 | 122.4 (3) |
| O1—C1—N3 | 123.5 (3) | C13—C8—C7 | 120.9 (3) |
| O1—C1—C2 | 123.1 (3) | C10—C9—C8 | 122.4 (3) |
| N3—C1—C2 | 113.3 (3) | C10—C9—Cl1 | 118.5 (3) |
| C3—C2—N1 | 108.5 (3) | C8—C9—Cl1 | 119.1 (2) |
| C3—C2—C1 | 128.8 (3) | C11—C10—C9 | 119.6 (3) |
| N1—C2—C1 | 122.6 (3) | C11—C10—H10 | 120.2 |
| C2—C3—C4 | 106.1 (3) | C9—C10—H10 | 120.2 |
| C2—C3—H3A | 126.9 | C12—C11—C10 | 119.8 (3) |
| C4—C3—H3A | 126.9 | C12—C11—H11 | 120.1 |
| C5—C4—C3 | 109.2 (3) | C10—C11—H11 | 120.1 |
| C5—C4—N2 | 124.3 (3) | C11—C12—C13 | 120.2 (3) |
| C3—C4—N2 | 126.4 (3) | C11—C12—H12 | 119.9 |
| N1—C5—C4 | 107.6 (3) | C13—C12—H12 | 119.9 |
| N1—C5—H5 | 126.2 | C12—C13—C8 | 121.3 (3) |
| C4—C5—H5 | 126.2 | C12—C13—H13 | 119.4 |
| N1—C6—H6A | 109.5 | C8—C13—H13 | 119.4 |
| C1—N3—N4—C7 | 171.3 (3) | C2—N1—C5—C4 | 1.7 (4) |
| N4—N3—C1—O1 | −0.5 (5) | C6—N1—C5—C4 | 177.5 (3) |
| N4—N3—C1—C2 | −177.2 (3) | C3—C4—C5—N1 | −1.2 (4) |
| C5—N1—C2—C3 | −1.6 (4) | N2—C4—C5—N1 | 178.0 (3) |
| C6—N1—C2—C3 | −177.2 (3) | N3—N4—C7—C8 | 175.1 (3) |
| C5—N1—C2—C1 | −177.7 (3) | N4—C7—C8—C9 | 168.3 (3) |
| C6—N1—C2—C1 | 6.7 (5) | N4—C7—C8—C13 | −14.7 (5) |
| O1—C1—C2—C3 | −147.4 (4) | C13—C8—C9—C10 | −0.6 (6) |
| N3—C1—C2—C3 | 29.3 (5) | C7—C8—C9—C10 | 176.4 (4) |
| O1—C1—C2—N1 | 27.9 (5) | C13—C8—C9—Cl1 | 178.0 (3) |
| N3—C1—C2—N1 | −155.5 (3) | C7—C8—C9—Cl1 | −4.9 (5) |
| N1—C2—C3—C4 | 0.8 (4) | C8—C9—C10—C11 | −0.7 (6) |
| C1—C2—C3—C4 | 176.6 (3) | Cl1—C9—C10—C11 | −179.4 (3) |
| C2—C3—C4—C5 | 0.3 (4) | C9—C10—C11—C12 | 1.2 (6) |
| C2—C3—C4—N2 | −178.9 (3) | C10—C11—C12—C13 | −0.4 (6) |
| O3—N2—C4—C5 | −6.7 (6) | C11—C12—C13—C8 | −1.0 (6) |
| O2—N2—C4—C5 | 175.1 (4) | C9—C8—C13—C12 | 1.5 (5) |
| O3—N2—C4—C3 | 172.3 (3) | C7—C8—C13—C12 | −175.6 (3) |
| O2—N2—C4—C3 | −5.9 (6) |
| H··· | ||||
| N3—H3···O1i | 0.86 | 2.14 | 2.941 (3) | 154 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N3—H3⋯O1i | 0.86 | 2.14 | 2.941 (3) | 154 |
Symmetry code: (i) .