Literature DB >> 24527025

(E)-N'-(2-Chloro-benzyl-idene)-1-methyl-4-nitro-1H-pyrrole-2-carbohydrazide.

Jinglin Wang1, Rong He1, Zhijuan Xin1, Huiling Shen1, Cairong Wang1.   

Abstract

In the title compound, C13H11ClN4O3, the phenyl and pyrrolyl ring are linked by an ac-yl-hydrazone (R 2C=N-N-CO-R) group, forming a slightly bent mol-ecule: the dihedral angle subtended by the the phenyl and pyrrolyl rings is 8.46 (12)°. In the crystal, the three-dimensional supra-molecular structure is assembled by N-H⋯O hydrogen bonding. Mol-ecular sheets are formed parallel to (101) in a herringbone arrangement by weak van der Waals inter-actions; weak π-π [centroid-centroid phen-yl-phenyl and pyrrol-yl-pyrrolyl distances of 3.7816 (3) and 3.8946 (2) Å, respectively] inter-actions occur between neighbouring sheets.

Entities:  

Year:  2013        PMID: 24527025      PMCID: PMC3914118          DOI: 10.1107/S1600536813034119

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications and structures of aroylhydrazones, see: Raja et al. (2012 ▶); Wang et al. (2014 ▶).

Experimental

Crystal data

C13H11ClN4O3 M = 306.71 Monoclinic, a = 13.7649 (13) Å b = 12.4993 (11) Å c = 8.1263 (10) Å β = 95.523 (1)° V = 1391.7 (2) Å3 Z = 4 Mo Kα radiation μ = 0.29 mm−1 T = 298 K 0.30 × 0.20 × 0.16 mm

Data collection

Bruker SMART 1000 CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.918, T max = 0.955 6871 measured reflections 2452 independent reflections 1435 reflections with I > 2σ(I) R int = 0.071

Refinement

R[F 2 > 2σ(F 2)] = 0.061 wR(F 2) = 0.164 S = 1.00 2452 reflections 191 parameters H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.33 e Å−3 Data collection: SMART (Bruker, 1999 ▶); cell refinement: SAINT (Bruker, 1999 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 1999 ▶) and SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶) and SHELXTL. Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536813034119/ff2124sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813034119/ff2124Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536813034119/ff2124Isup3.cml Additional supporting information: crystallographic information; 3D view; checkCIF report
C13H11ClN4O3F(000) = 632
Mr = 306.71Dx = 1.464 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 13.7649 (13) ÅCell parameters from 1539 reflections
b = 12.4993 (11) Åθ = 3.0–25.2°
c = 8.1263 (10) ŵ = 0.29 mm1
β = 95.523 (1)°T = 298 K
V = 1391.7 (2) Å3Block, yellow
Z = 40.30 × 0.20 × 0.16 mm
Bruker SMART 1000 CCD diffractometer2452 independent reflections
Radiation source: fine-focus sealed tube1435 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.071
phi and ω scansθmax = 25.0°, θmin = 1.5°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −15→16
Tmin = 0.918, Tmax = 0.955k = −14→14
6871 measured reflectionsl = −6→9
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.061Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.164H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.0787P)2] where P = (Fo2 + 2Fc2)/3
2452 reflections(Δ/σ)max = 0.001
191 parametersΔρmax = 0.23 e Å3
0 restraintsΔρmin = −0.33 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.29032 (9)1.16858 (8)1.00653 (18)0.1044 (6)
N10.14340 (19)0.51021 (19)1.0868 (3)0.0508 (7)
N2−0.0430 (2)0.5940 (3)1.3388 (4)0.0712 (9)
N30.24317 (19)0.7725 (2)1.0085 (3)0.0512 (8)
H30.22310.79961.09640.061*
N40.30201 (18)0.83156 (19)0.9133 (3)0.0470 (7)
O10.24317 (17)0.62828 (16)0.8366 (3)0.0587 (7)
O2−0.0656 (2)0.6852 (3)1.3780 (4)0.1057 (12)
O3−0.08399 (19)0.5122 (3)1.3789 (3)0.0907 (9)
C10.2175 (2)0.6716 (2)0.9618 (4)0.0465 (8)
C20.1506 (2)0.6203 (2)1.0708 (4)0.0451 (8)
C30.0829 (2)0.6674 (3)1.1612 (4)0.0514 (8)
H3A0.07110.74031.17150.062*
C40.0352 (2)0.5839 (3)1.2344 (4)0.0561 (9)
C50.0737 (2)0.4884 (3)1.1897 (4)0.0573 (9)
H50.05540.42091.22350.069*
C60.2046 (3)0.4285 (3)1.0169 (5)0.0659 (10)
H6A0.27080.43621.06420.099*
H6B0.20170.43760.89920.099*
H6C0.18100.35861.04160.099*
C70.3117 (2)0.9297 (2)0.9548 (4)0.0483 (8)
H70.27640.95691.03730.058*
C80.3779 (2)1.0000 (2)0.8743 (4)0.0467 (8)
C90.3778 (2)1.1102 (2)0.8944 (4)0.0571 (9)
C100.4438 (3)1.1761 (3)0.8256 (5)0.0698 (11)
H100.44131.24980.84060.084*
C110.5133 (3)1.1319 (3)0.7348 (5)0.0698 (11)
H110.55871.17560.69000.084*
C120.5154 (3)1.0231 (3)0.7108 (5)0.0659 (10)
H120.56200.99330.64910.079*
C130.4481 (2)0.9577 (3)0.7784 (4)0.0568 (9)
H130.44970.88430.75980.068*
U11U22U33U12U13U23
Cl10.1002 (9)0.0517 (6)0.1730 (14)0.0028 (6)0.0731 (9)−0.0179 (7)
N10.0553 (16)0.0427 (14)0.0560 (18)−0.0065 (13)0.0130 (13)0.0045 (13)
N20.057 (2)0.102 (3)0.057 (2)−0.019 (2)0.0189 (16)0.0023 (19)
N30.0646 (18)0.0459 (15)0.0477 (17)−0.0109 (13)0.0286 (14)−0.0042 (12)
N40.0549 (16)0.0436 (15)0.0455 (16)−0.0057 (13)0.0199 (13)0.0025 (11)
O10.0821 (17)0.0499 (12)0.0490 (14)−0.0105 (12)0.0310 (12)−0.0064 (11)
O20.088 (2)0.121 (3)0.117 (3)−0.010 (2)0.056 (2)−0.027 (2)
O30.0637 (17)0.134 (3)0.077 (2)−0.0337 (18)0.0193 (14)0.0198 (18)
C10.053 (2)0.0444 (17)0.045 (2)−0.0027 (15)0.0197 (15)0.0023 (14)
C20.0476 (18)0.0425 (16)0.047 (2)−0.0063 (14)0.0123 (15)−0.0010 (14)
C30.0496 (19)0.0530 (18)0.054 (2)−0.0032 (16)0.0153 (16)−0.0007 (16)
C40.0516 (19)0.069 (2)0.050 (2)−0.0095 (18)0.0160 (16)0.0016 (17)
C50.059 (2)0.059 (2)0.055 (2)−0.0168 (18)0.0113 (17)0.0151 (17)
C60.075 (3)0.0447 (18)0.079 (3)0.0036 (18)0.014 (2)0.0010 (18)
C70.0515 (19)0.0442 (18)0.053 (2)−0.0001 (15)0.0227 (16)−0.0005 (15)
C80.0473 (18)0.0431 (16)0.052 (2)−0.0039 (15)0.0150 (15)0.0006 (14)
C90.056 (2)0.0442 (18)0.074 (3)−0.0032 (16)0.0199 (18)0.0008 (17)
C100.068 (2)0.0459 (19)0.098 (3)−0.0110 (18)0.021 (2)0.0092 (19)
C110.061 (2)0.076 (3)0.074 (3)−0.013 (2)0.016 (2)0.018 (2)
C120.063 (2)0.075 (3)0.064 (3)−0.002 (2)0.0284 (19)0.003 (2)
C130.064 (2)0.0502 (19)0.059 (2)−0.0029 (17)0.0220 (18)0.0008 (16)
Cl1—C91.739 (3)C5—H50.9300
N1—C51.359 (4)C6—H6A0.9600
N1—C21.387 (4)C6—H6B0.9600
N1—C61.472 (4)C6—H6C0.9600
N2—O31.227 (4)C7—C81.465 (4)
N2—O21.232 (4)C7—H70.9300
N2—C41.439 (4)C8—C91.387 (4)
N3—C11.354 (4)C8—C131.402 (4)
N3—N41.386 (3)C9—C101.383 (5)
N3—H30.8600C10—C111.379 (5)
N4—C71.276 (4)C10—H100.9300
O1—C11.234 (3)C11—C121.374 (5)
C1—C21.483 (4)C11—H110.9300
C2—C31.374 (4)C12—C131.388 (4)
C3—C41.397 (4)C12—H120.9300
C3—H3A0.9300C13—H130.9300
C4—C51.369 (5)
C5—N1—C2108.5 (3)N1—C6—H6B109.5
C5—N1—C6124.2 (3)H6A—C6—H6B109.5
C2—N1—C6127.1 (2)N1—C6—H6C109.5
O3—N2—O2124.7 (3)H6A—C6—H6C109.5
O3—N2—C4118.2 (4)H6B—C6—H6C109.5
O2—N2—C4117.1 (3)N4—C7—C8120.8 (3)
C1—N3—N4119.4 (2)N4—C7—H7119.6
C1—N3—H3120.3C8—C7—H7119.6
N4—N3—H3120.3C9—C8—C13116.7 (3)
C7—N4—N3114.6 (2)C9—C8—C7122.4 (3)
O1—C1—N3123.5 (3)C13—C8—C7120.9 (3)
O1—C1—C2123.1 (3)C10—C9—C8122.4 (3)
N3—C1—C2113.3 (3)C10—C9—Cl1118.5 (3)
C3—C2—N1108.5 (3)C8—C9—Cl1119.1 (2)
C3—C2—C1128.8 (3)C11—C10—C9119.6 (3)
N1—C2—C1122.6 (3)C11—C10—H10120.2
C2—C3—C4106.1 (3)C9—C10—H10120.2
C2—C3—H3A126.9C12—C11—C10119.8 (3)
C4—C3—H3A126.9C12—C11—H11120.1
C5—C4—C3109.2 (3)C10—C11—H11120.1
C5—C4—N2124.3 (3)C11—C12—C13120.2 (3)
C3—C4—N2126.4 (3)C11—C12—H12119.9
N1—C5—C4107.6 (3)C13—C12—H12119.9
N1—C5—H5126.2C12—C13—C8121.3 (3)
C4—C5—H5126.2C12—C13—H13119.4
N1—C6—H6A109.5C8—C13—H13119.4
C1—N3—N4—C7171.3 (3)C2—N1—C5—C41.7 (4)
N4—N3—C1—O1−0.5 (5)C6—N1—C5—C4177.5 (3)
N4—N3—C1—C2−177.2 (3)C3—C4—C5—N1−1.2 (4)
C5—N1—C2—C3−1.6 (4)N2—C4—C5—N1178.0 (3)
C6—N1—C2—C3−177.2 (3)N3—N4—C7—C8175.1 (3)
C5—N1—C2—C1−177.7 (3)N4—C7—C8—C9168.3 (3)
C6—N1—C2—C16.7 (5)N4—C7—C8—C13−14.7 (5)
O1—C1—C2—C3−147.4 (4)C13—C8—C9—C10−0.6 (6)
N3—C1—C2—C329.3 (5)C7—C8—C9—C10176.4 (4)
O1—C1—C2—N127.9 (5)C13—C8—C9—Cl1178.0 (3)
N3—C1—C2—N1−155.5 (3)C7—C8—C9—Cl1−4.9 (5)
N1—C2—C3—C40.8 (4)C8—C9—C10—C11−0.7 (6)
C1—C2—C3—C4176.6 (3)Cl1—C9—C10—C11−179.4 (3)
C2—C3—C4—C50.3 (4)C9—C10—C11—C121.2 (6)
C2—C3—C4—N2−178.9 (3)C10—C11—C12—C13−0.4 (6)
O3—N2—C4—C5−6.7 (6)C11—C12—C13—C8−1.0 (6)
O2—N2—C4—C5175.1 (4)C9—C8—C13—C121.5 (5)
O3—N2—C4—C3172.3 (3)C7—C8—C13—C12−175.6 (3)
O2—N2—C4—C3−5.9 (6)
D—H···AD—HH···AD···AD—H···A
N3—H3···O1i0.862.142.941 (3)154
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N3—H3⋯O1i 0.862.142.941 (3)154

Symmetry code: (i) .

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