Literature DB >> 24527020

1-(1-Benzo-furan-2-yl)ethanone O-(2,6-di-fluoro-benz-yl)oxime.

Tomasz Kosmalski1, Andrzej K Gzella2.   

Abstract

In the title compound, C17H13F2NO2, the 2,2-di-fluoro-benz-yloxy residue assumes an E configuration with respect to the benzo-furan system. The benzene ring makes a dihedral angle of 61.70 (4)° with the fused ring system (r.m.s. deviation = 0.008 Å). In the crystal, mol-ecules are connected by weak C-H⋯F hydrogen bonds into chains extending parallel to the b-axis direction.

Entities:  

Year:  2013        PMID: 24527020      PMCID: PMC3914113          DOI: 10.1107/S1600536813034090

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to anti­fungal agents, see: Benedetti & Bani (1999 ▶); Sheehan et al. (1999 ▶). For the biological activity of oximes and their ethers, see: Attia et al. (2013 ▶); De Luca (2006 ▶); Emami et al. (2004 ▶); Karakurt et al. (2001 ▶); Massolini et al. (1993 ▶); Mixich & Thiele (1985 ▶). For the synthesis of the title compound, see: Demirayak et al. (2002 ▶).

Experimental

Crystal data

C17H13F2NO2 M = 301.28 Monoclinic, a = 7.36652 (17) Å b = 17.0314 (4) Å c = 11.2047 (2) Å β = 90.020 (2)° V = 1405.76 (5) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 130 K 0.35 × 0.15 × 0.12 mm

Data collection

Agilent Xcalibur Atlas diffractometer Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011 ▶) T min = 0.992, T max = 1.000 24335 measured reflections 3548 independent reflections 2887 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.099 S = 1.03 3548 reflections 200 parameters H-atom parameters constrained Δρmax = 0.26 e Å−3 Δρmin = −0.24 e Å−3 Data collection: CrysAlis PRO (Agilent, 2011 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶) and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, publication_text. DOI: 10.1107/S1600536813034090/zs2281sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813034090/zs2281Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536813034090/zs2281Isup3.cml Additional supporting information: crystallographic information; 3D view; checkCIF report
C17H13F2NO2F(000) = 624
Mr = 301.28Dx = 1.424 Mg m3
Monoclinic, P21/nMelting point = 346–348 K
Hall symbol: -P 2ynMo Kα radiation, λ = 0.71073 Å
a = 7.36652 (17) ÅCell parameters from 10469 reflections
b = 17.0314 (4) Åθ = 2.2–29.1°
c = 11.2047 (2) ŵ = 0.11 mm1
β = 90.020 (2)°T = 130 K
V = 1405.76 (5) Å3Indefinite, colourless
Z = 40.35 × 0.15 × 0.12 mm
Agilent Xcalibur Atlas diffractometer3548 independent reflections
Radiation source: Enhance (Mo) X-ray Source2887 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.033
Detector resolution: 10.3088 pixels mm-1θmax = 29.1°, θmin = 2.2°
ω scansh = −9→10
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011)k = −23→22
Tmin = 0.992, Tmax = 1.000l = −14→15
24335 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.099H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0434P)2 + 0.5216P] where P = (Fo2 + 2Fc2)/3
3548 reflections(Δ/σ)max < 0.001
200 parametersΔρmax = 0.26 e Å3
0 restraintsΔρmin = −0.24 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.16108 (11)0.14365 (5)0.55614 (7)0.0225 (2)
C20.01949 (16)0.13157 (7)0.47691 (11)0.0202 (2)
C30.05125 (18)0.16689 (7)0.37076 (11)0.0246 (3)
H3−0.02450.16670.30440.030*
C40.22538 (17)0.20490 (7)0.38062 (11)0.0228 (3)
C50.3345 (2)0.25081 (8)0.30607 (12)0.0292 (3)
H50.29640.26390.22950.035*
C60.50053 (19)0.27631 (8)0.34892 (13)0.0302 (3)
H60.57500.30650.30010.036*
C70.55844 (18)0.25753 (8)0.46421 (13)0.0294 (3)
H70.67110.27530.49020.035*
C80.45207 (18)0.21312 (8)0.54084 (13)0.0268 (3)
H80.48930.20090.61790.032*
C90.28652 (16)0.18797 (7)0.49543 (11)0.0208 (3)
C10−0.13574 (16)0.08676 (7)0.52060 (11)0.0199 (2)
C11−0.27542 (17)0.05873 (8)0.43335 (11)0.0246 (3)
H11A−0.24680.00620.40880.037*
H11B−0.27610.09260.36490.037*
H11C−0.39290.05940.47040.037*
N12−0.13799 (14)0.07490 (6)0.63388 (9)0.0226 (2)
O13−0.29434 (11)0.03251 (5)0.66817 (8)0.0240 (2)
C14−0.28904 (17)0.02743 (9)0.79613 (11)0.0275 (3)
H14A−0.26830.07890.83050.033*
H14B−0.1917−0.00720.82130.033*
C15−0.46849 (16)−0.00434 (7)0.83627 (10)0.0200 (2)
C16−0.62337 (17)0.04170 (7)0.83715 (11)0.0222 (3)
C17−0.79223 (18)0.01540 (9)0.87023 (12)0.0287 (3)
H17−0.89240.04860.86870.034*
C18−0.80877 (19)−0.06188 (9)0.90588 (12)0.0316 (3)
H18−0.9222−0.08130.92720.038*
C19−0.6595 (2)−0.11065 (8)0.91027 (12)0.0332 (3)
H19−0.6704−0.16240.93580.040*
C20−0.49296 (19)−0.08056 (7)0.87563 (11)0.0252 (3)
F21−0.60530 (12)0.11776 (5)0.80385 (8)0.0363 (2)
F22−0.34453 (13)−0.12699 (5)0.88276 (8)0.0428 (2)
U11U22U33U12U13U23
O10.0189 (4)0.0270 (5)0.0216 (4)−0.0037 (3)0.0001 (3)0.0006 (3)
C20.0188 (6)0.0209 (6)0.0209 (6)0.0000 (4)−0.0008 (5)−0.0047 (4)
C30.0256 (6)0.0270 (6)0.0211 (6)−0.0050 (5)−0.0012 (5)−0.0009 (5)
C40.0255 (6)0.0196 (6)0.0234 (6)−0.0031 (5)0.0016 (5)−0.0029 (4)
C50.0362 (8)0.0257 (6)0.0257 (7)−0.0078 (6)0.0016 (6)0.0011 (5)
C60.0326 (7)0.0229 (6)0.0350 (7)−0.0088 (5)0.0080 (6)−0.0012 (5)
C70.0219 (6)0.0255 (6)0.0407 (8)−0.0061 (5)0.0002 (6)−0.0051 (5)
C80.0231 (6)0.0277 (7)0.0295 (7)−0.0016 (5)−0.0023 (5)−0.0006 (5)
C90.0207 (6)0.0174 (5)0.0244 (6)−0.0004 (4)0.0041 (5)−0.0018 (4)
C100.0188 (6)0.0203 (6)0.0206 (6)0.0013 (4)0.0020 (5)−0.0028 (4)
C110.0253 (6)0.0271 (6)0.0213 (6)−0.0052 (5)−0.0005 (5)−0.0023 (5)
N120.0160 (5)0.0292 (6)0.0225 (5)−0.0043 (4)0.0033 (4)−0.0012 (4)
O130.0174 (4)0.0369 (5)0.0178 (4)−0.0076 (4)0.0023 (3)0.0005 (4)
C140.0184 (6)0.0468 (8)0.0173 (6)−0.0052 (5)−0.0012 (5)0.0029 (5)
C150.0181 (6)0.0286 (6)0.0134 (5)−0.0020 (5)−0.0008 (4)0.0004 (4)
C160.0231 (6)0.0243 (6)0.0194 (6)−0.0022 (5)−0.0023 (5)0.0030 (4)
C170.0185 (6)0.0426 (8)0.0249 (7)−0.0001 (5)0.0006 (5)−0.0031 (6)
C180.0271 (7)0.0467 (8)0.0209 (6)−0.0161 (6)0.0027 (5)−0.0005 (6)
C190.0520 (9)0.0264 (7)0.0212 (6)−0.0149 (6)−0.0030 (6)0.0039 (5)
C200.0317 (7)0.0261 (6)0.0179 (6)0.0044 (5)−0.0037 (5)−0.0015 (5)
F210.0375 (5)0.0264 (4)0.0449 (5)0.0016 (3)−0.0033 (4)0.0099 (3)
F220.0504 (6)0.0360 (5)0.0421 (5)0.0204 (4)−0.0081 (4)−0.0012 (4)
O1—C91.3736 (14)C11—H11B0.9600
O1—C21.3848 (15)C11—H11C0.9600
C2—C31.3534 (17)N12—O131.4127 (13)
C2—C101.4594 (17)O13—C141.4369 (15)
C3—C41.4410 (18)C14—C151.4977 (17)
C3—H30.9300C14—H14A0.9700
C4—C91.3929 (18)C14—H14B0.9700
C4—C51.3986 (18)C15—C201.3828 (18)
C5—C61.384 (2)C15—C161.3844 (17)
C5—H50.9300C16—F211.3547 (14)
C6—C71.397 (2)C16—C171.3732 (18)
C6—H60.9300C17—C181.381 (2)
C7—C81.3870 (19)C17—H170.9300
C7—H70.9300C18—C191.379 (2)
C8—C91.3890 (18)C18—H180.9300
C8—H80.9300C19—C201.385 (2)
C10—N121.2853 (16)C19—H190.9300
C10—C111.4972 (17)C20—F221.3517 (15)
C11—H11A0.9600
C9—O1—C2105.72 (9)H11A—C11—H11B109.5
C3—C2—O1111.52 (11)C10—C11—H11C109.5
C3—C2—C10131.52 (11)H11A—C11—H11C109.5
O1—C2—C10116.92 (10)H11B—C11—H11C109.5
C2—C3—C4106.64 (11)C10—N12—O13111.08 (10)
C2—C3—H3126.7N12—O13—C14106.28 (9)
C4—C3—H3126.7O13—C14—C15107.32 (10)
C9—C4—C5118.79 (12)O13—C14—H14A110.3
C9—C4—C3105.39 (11)C15—C14—H14A110.3
C5—C4—C3135.82 (13)O13—C14—H14B110.3
C6—C5—C4118.45 (13)C15—C14—H14B110.3
C6—C5—H5120.8H14A—C14—H14B108.5
C4—C5—H5120.8C20—C15—C16114.96 (11)
C5—C6—C7121.23 (12)C20—C15—C14123.38 (12)
C5—C6—H6119.4C16—C15—C14121.67 (11)
C7—C6—H6119.4F21—C16—C17118.38 (12)
C8—C7—C6121.65 (12)F21—C16—C15117.30 (11)
C8—C7—H7119.2C17—C16—C15124.32 (12)
C6—C7—H7119.2C16—C17—C18117.97 (13)
C7—C8—C9115.95 (13)C16—C17—H17121.0
C7—C8—H8122.0C18—C17—H17121.0
C9—C8—H8122.0C19—C18—C17120.94 (12)
O1—C9—C8125.36 (12)C19—C18—H18119.5
O1—C9—C4110.72 (10)C17—C18—H18119.5
C8—C9—C4123.92 (12)C18—C19—C20118.26 (12)
N12—C10—C2115.07 (11)C18—C19—H19120.9
N12—C10—C11125.85 (11)C20—C19—H19120.9
C2—C10—C11119.08 (11)F22—C20—C15117.55 (12)
C10—C11—H11A109.5F22—C20—C19118.92 (12)
C10—C11—H11B109.5C15—C20—C19123.51 (12)
C9—O1—C2—C3−0.51 (13)O1—C2—C10—C11−168.36 (10)
C9—O1—C2—C10−178.77 (10)C2—C10—N12—O13178.89 (9)
O1—C2—C3—C4−0.06 (14)C11—C10—N12—O13−1.33 (17)
C10—C2—C3—C4177.86 (12)C10—N12—O13—C14−176.13 (10)
C2—C3—C4—C90.60 (14)N12—O13—C14—C15170.08 (10)
C2—C3—C4—C5−179.29 (15)O13—C14—C15—C20105.09 (13)
C9—C4—C5—C61.18 (19)O13—C14—C15—C16−75.36 (15)
C3—C4—C5—C6−178.95 (14)C20—C15—C16—F21177.47 (11)
C4—C5—C6—C7−0.5 (2)C14—C15—C16—F21−2.12 (17)
C5—C6—C7—C8−0.4 (2)C20—C15—C16—C17−2.02 (18)
C6—C7—C8—C90.70 (19)C14—C15—C16—C17178.39 (12)
C2—O1—C9—C8−179.21 (12)F21—C16—C17—C18−178.97 (11)
C2—O1—C9—C40.91 (13)C15—C16—C17—C180.5 (2)
C7—C8—C9—O1−179.90 (11)C16—C17—C18—C191.2 (2)
C7—C8—C9—C4−0.03 (19)C17—C18—C19—C20−1.3 (2)
C5—C4—C9—O1178.96 (11)C16—C15—C20—F22−176.55 (11)
C3—C4—C9—O1−0.95 (13)C14—C15—C20—F223.03 (18)
C5—C4—C9—C8−0.92 (19)C16—C15—C20—C191.93 (18)
C3—C4—C9—C8179.17 (12)C14—C15—C20—C19−178.49 (12)
C3—C2—C10—N12−166.39 (13)C18—C19—C20—F22178.09 (12)
O1—C2—C10—N1211.44 (16)C18—C19—C20—C15−0.4 (2)
C3—C2—C10—C1113.8 (2)
D—H···AD—HH···AD···AD—H···A
C7—H7···F22i0.932.543.3537 (16)147
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C7—H7⋯F22i 0.932.543.3537 (16)147

Symmetry code: (i) .

  9 in total

Review 1.  Metabolism-based drug interactions involving oral azole antifungals in humans.

Authors:  M Strolin Benedetti; M Bani
Journal:  Drug Metab Rev       Date:  1999-08       Impact factor: 4.518

2.  Stereoselective synthesis and antifungal activity of (Z)-trans-3-azolyl-2-methylchromanone oxime ethers.

Authors:  Saeed Emami; Mehraban Falahati; Ali Banifatemi; Abbas Shafiee
Journal:  Bioorg Med Chem       Date:  2004-11-15       Impact factor: 3.641

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Fungicidal activity of new O-derivatives of phenylpyridylketoximes.

Authors:  G Massolini; M L Carmellino; M Kitsos; A Baruffini
Journal:  Farmaco       Date:  1993-04

5.  Synthesis of some 1-(2-naphthyl)-2-(imidazole-1-yl)ethanone oxime and oxime ether derivatives and their anticonvulsant and antimicrobial activities.

Authors:  A Karakurt; S Dalkara; M Ozalp; S Ozbey; E Kendi; J P Stables
Journal:  Eur J Med Chem       Date:  2001-05       Impact factor: 6.514

6.  Synthesis and antifungal activities of some aryl(benzofuran-2-yl)ketoximes.

Authors:  Seref Demirayak; Umit Uçucu; Kadriye Benkli; Nalan Gündoğdu-Karaburun; Ahmet Cağri Karaburun; Derya Akar; Muhammed Karabacak; Nuri Kiraz
Journal:  Farmaco       Date:  2002-07

Review 7.  Current and emerging azole antifungal agents.

Authors:  D J Sheehan; C A Hitchcock; C M Sibley
Journal:  Clin Microbiol Rev       Date:  1999-01       Impact factor: 26.132

8.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20

9.  In vitro anti-Candida activity of certain new 3-(1H-imidazol-1-yl)propan-1-one oxime esters.

Authors:  Mohamed I Attia; Azza S Zakaria; Maha S Almutairi; Soraya W Ghoneim
Journal:  Molecules       Date:  2013-09-30       Impact factor: 4.411

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.