Literature DB >> 24527017

(2Z,4E)-1-(5-Fluoro-2-hy-droxy-phen-yl)-5-(4-fluoro-phen-yl)-3-hy-droxy-penta-2,4-dien-1-one.

Jing-Wei Chen1, Zhuo He2, Zhen Wu2, Mei-Juan Fang2, Hua Fang3.   

Abstract

In the title mol-ecule, C17H12F2O3, the dihedral angle between the benzene rings is 8.6 (2)°. In the crystal, two pairs of O-H⋯O hydrogen bonds connect the mol-ecules into inversion dimers. In addition, weak C-H⋯F hydrogen bonds link the dimers into a two-dimensional network parallel to (10-4). The carbonyl O atom is an acceptor for two weak intra-molecular hydrogen bonds.

Entities:  

Year:  2013        PMID: 24527017      PMCID: PMC3914111          DOI: 10.1107/S1600536813033564

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activities of chalcones, see: Meng et al. (2007 ▶); Schobert et al. (2009 ▶). For the synthesis, see: Baker (1933 ▶); Mahal & Venkataraman (1934 ▶). For a related structure, see: Fun et al. (2012 ▶).

Experimental

Crystal data

C17H12F2O3 M = 302.27 Monoclinic, a = 6.8275 (18) Å b = 14.004 (4) Å c = 14.267 (4) Å β = 91.293 (5)° V = 1363.8 (7) Å3 Z = 4 Mo Kα radiation μ = 0.12 mm−1 T = 173 K 0.32 × 0.23 × 0.18 mm

Data collection

Bruker APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.963, T max = 0.979 6787 measured reflections 2392 independent reflections 2040 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.053 wR(F 2) = 0.147 S = 1.08 2392 reflections 199 parameters H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.29 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT ; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536813033564/lh5672sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813033564/lh5672Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536813033564/lh5672Isup3.cml Additional supporting information: crystallographic information; 3D view; checkCIF report
C17H12F2O3F(000) = 624
Mr = 302.27Dx = 1.472 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2113 reflections
a = 6.8275 (18) Åθ = 1.6–27.3°
b = 14.004 (4) ŵ = 0.12 mm1
c = 14.267 (4) ÅT = 173 K
β = 91.293 (5)°Block, yellow
V = 1363.8 (7) Å30.32 × 0.23 × 0.18 mm
Z = 4
Bruker APEX CCD diffractometer2392 independent reflections
Radiation source: fine-focus sealed tube2040 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.028
φ and ω scanθmax = 25.0°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −8→8
Tmin = 0.963, Tmax = 0.979k = −16→16
6787 measured reflectionsl = −12→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.053Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.147H-atom parameters constrained
S = 1.08w = 1/[σ2(Fo2) + (0.073P)2 + 0.3861P] where P = (Fo2 + 2Fc2)/3
2392 reflections(Δ/σ)max < 0.001
199 parametersΔρmax = 0.21 e Å3
0 restraintsΔρmin = −0.29 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
F1−1.0830 (2)1.43310 (10)0.38367 (11)0.0579 (5)
F2−1.6953 (2)0.59884 (10)0.25050 (10)0.0577 (5)
O3−0.7476 (2)0.93089 (10)0.42390 (11)0.0383 (4)
H3A−0.65980.96750.44040.057*
O2−0.5856 (2)1.09111 (10)0.45331 (11)0.0348 (4)
O1−0.3972 (2)1.24886 (10)0.46202 (11)0.0391 (4)
H1A−0.41081.19080.46490.059*
C16−1.5714 (3)0.75182 (16)0.27847 (15)0.0371 (5)
H16A−1.69150.77800.26020.045*
C6−0.9127 (3)1.38522 (15)0.40188 (16)0.0371 (5)
C9−0.9017 (3)0.98066 (14)0.39432 (13)0.0276 (5)
C1−0.7404 (3)1.13263 (14)0.42564 (13)0.0258 (5)
C7−0.9178 (3)1.28835 (15)0.40533 (15)0.0328 (5)
H7A−1.03521.25590.39520.039*
C5−0.7442 (4)1.43672 (16)0.41622 (16)0.0401 (6)
H5A−0.74551.50300.41270.048*
C13−1.2171 (3)0.67182 (15)0.33270 (14)0.0336 (5)
H13A−1.09790.64470.35110.040*
C8−0.9043 (3)1.07757 (14)0.39450 (14)0.0287 (5)
H8A−1.01701.10900.37360.034*
C3−0.5709 (3)1.28979 (15)0.44117 (14)0.0297 (5)
C14−1.3700 (4)0.61349 (16)0.30486 (16)0.0400 (6)
H14A−1.35580.54740.30410.048*
C11−1.0733 (3)0.83020 (14)0.36333 (14)0.0287 (5)
H11A−0.96130.79870.38520.034*
C2−0.7438 (3)1.23770 (14)0.42429 (13)0.0271 (5)
C17−1.4183 (3)0.80885 (16)0.30625 (15)0.0331 (5)
H17A−1.43520.87470.30680.040*
C10−1.0668 (3)0.92464 (14)0.36235 (14)0.0294 (5)
H10A−1.17660.95710.33940.035*
C15−1.5432 (3)0.65543 (17)0.27832 (15)0.0385 (6)
C12−1.2379 (3)0.77070 (14)0.33372 (13)0.0265 (5)
C4−0.5740 (3)1.38854 (15)0.43586 (16)0.0374 (6)
H4A−0.45851.42260.44580.045*
U11U22U33U12U13U23
F10.0450 (9)0.0381 (8)0.0906 (12)0.0127 (6)0.0004 (8)0.0083 (8)
F20.0554 (10)0.0552 (9)0.0619 (10)−0.0309 (7)−0.0138 (7)−0.0001 (7)
O30.0275 (8)0.0281 (8)0.0588 (11)0.0005 (6)−0.0106 (7)−0.0042 (7)
O20.0258 (8)0.0298 (8)0.0483 (9)−0.0013 (6)−0.0062 (7)0.0013 (7)
O10.0295 (9)0.0346 (8)0.0530 (10)−0.0088 (7)−0.0058 (7)0.0058 (7)
C160.0306 (12)0.0444 (13)0.0363 (13)−0.0028 (10)0.0002 (9)−0.0039 (10)
C60.0374 (13)0.0306 (11)0.0434 (13)0.0058 (10)0.0033 (10)0.0042 (10)
C90.0268 (11)0.0301 (11)0.0258 (11)0.0005 (9)−0.0012 (8)0.0017 (8)
C10.0235 (10)0.0308 (11)0.0231 (10)0.0005 (8)0.0001 (8)0.0016 (8)
C70.0307 (12)0.0318 (11)0.0358 (12)−0.0020 (9)0.0008 (9)0.0010 (9)
C50.0508 (15)0.0260 (11)0.0438 (14)−0.0027 (10)0.0066 (11)0.0006 (10)
C130.0369 (13)0.0324 (11)0.0313 (12)−0.0010 (9)0.0002 (9)0.0019 (9)
C80.0251 (11)0.0297 (11)0.0310 (11)−0.0015 (8)−0.0066 (8)0.0042 (9)
C30.0307 (12)0.0315 (11)0.0269 (11)−0.0046 (9)0.0012 (9)0.0016 (9)
C140.0535 (15)0.0282 (11)0.0383 (13)−0.0097 (11)0.0018 (11)−0.0012 (10)
C110.0271 (12)0.0333 (11)0.0257 (11)0.0009 (9)0.0005 (8)−0.0027 (9)
C20.0305 (11)0.0284 (11)0.0224 (10)−0.0028 (9)0.0023 (8)0.0013 (8)
C170.0296 (12)0.0331 (11)0.0367 (12)−0.0009 (9)0.0014 (9)−0.0043 (9)
C100.0274 (11)0.0316 (11)0.0290 (11)−0.0011 (9)−0.0051 (9)0.0000 (9)
C150.0398 (14)0.0441 (13)0.0317 (12)−0.0205 (11)−0.0008 (10)−0.0013 (10)
C120.0299 (11)0.0291 (10)0.0206 (10)−0.0032 (9)0.0018 (8)−0.0019 (8)
C40.0413 (14)0.0312 (11)0.0397 (13)−0.0108 (10)0.0026 (10)−0.0030 (10)
F1—C61.362 (2)C5—C41.368 (3)
F2—C151.358 (2)C5—H5A0.9300
O3—C91.323 (2)C13—C141.377 (3)
O3—H3A0.8200C13—C121.392 (3)
O2—C11.262 (2)C13—H13A0.9300
O1—C31.345 (2)C8—H8A0.9300
O1—H1A0.8200C3—C41.385 (3)
C16—C151.363 (3)C3—C21.404 (3)
C16—C171.367 (3)C14—C151.366 (3)
C16—H16A0.9300C14—H14A0.9300
C6—C71.358 (3)C11—C101.323 (3)
C6—C51.369 (3)C11—C121.454 (3)
C9—C81.357 (3)C11—H11A0.9300
C9—C101.439 (3)C17—C121.391 (3)
C1—C81.422 (3)C17—H17A0.9300
C1—C21.472 (3)C10—H10A0.9300
C7—C21.404 (3)C4—H4A0.9300
C7—H7A0.9300
C9—O3—H3A109.5O1—C3—C2123.41 (18)
C3—O1—H1A109.5C4—C3—C2119.84 (19)
C15—C16—C17118.1 (2)C15—C14—C13118.1 (2)
C15—C16—H16A120.9C15—C14—H14A121.0
C17—C16—H16A120.9C13—C14—H14A121.0
C7—C6—F1118.4 (2)C10—C11—C12126.55 (19)
C7—C6—C5122.9 (2)C10—C11—H11A116.7
F1—C6—C5118.66 (19)C12—C11—H11A116.7
O3—C9—C8122.42 (18)C3—C2—C7118.35 (18)
O3—C9—C10115.18 (17)C3—C2—C1120.26 (18)
C8—C9—C10122.40 (18)C7—C2—C1121.38 (18)
O2—C1—C8119.71 (18)C16—C17—C12121.6 (2)
O2—C1—C2118.55 (17)C16—C17—H17A119.2
C8—C1—C2121.72 (18)C12—C17—H17A119.2
C6—C7—C2119.3 (2)C11—C10—C9124.61 (19)
C6—C7—H7A120.4C11—C10—H10A117.7
C2—C7—H7A120.4C9—C10—H10A117.7
C4—C5—C6118.6 (2)F2—C15—C16118.1 (2)
C4—C5—H5A120.7F2—C15—C14118.8 (2)
C6—C5—H5A120.7C16—C15—C14123.1 (2)
C14—C13—C12121.1 (2)C17—C12—C13117.98 (19)
C14—C13—H13A119.5C17—C12—C11122.39 (18)
C12—C13—H13A119.5C13—C12—C11119.63 (19)
C9—C8—C1122.19 (19)C5—C4—C3121.0 (2)
C9—C8—H8A118.9C5—C4—H4A119.5
C1—C8—H8A118.9C3—C4—H4A119.5
O1—C3—C4116.75 (18)
F1—C6—C7—C2−179.82 (18)C8—C1—C2—C79.5 (3)
C5—C6—C7—C20.0 (4)C15—C16—C17—C120.0 (3)
C7—C6—C5—C4−0.7 (4)C12—C11—C10—C9178.58 (19)
F1—C6—C5—C4179.0 (2)O3—C9—C10—C111.7 (3)
O3—C9—C8—C10.7 (3)C8—C9—C10—C11−178.0 (2)
C10—C9—C8—C1−179.63 (18)C17—C16—C15—F2−179.84 (19)
O2—C1—C8—C90.8 (3)C17—C16—C15—C140.2 (4)
C2—C1—C8—C9179.13 (19)C13—C14—C15—F2179.86 (19)
C12—C13—C14—C15−0.1 (3)C13—C14—C15—C16−0.2 (4)
O1—C3—C2—C7178.50 (19)C16—C17—C12—C13−0.3 (3)
C4—C3—C2—C7−2.1 (3)C16—C17—C12—C11179.90 (19)
O1—C3—C2—C1−2.1 (3)C14—C13—C12—C170.3 (3)
C4—C3—C2—C1177.29 (19)C14—C13—C12—C11−179.87 (19)
C6—C7—C2—C31.4 (3)C10—C11—C12—C17−4.8 (3)
C6—C7—C2—C1−177.92 (19)C10—C11—C12—C13175.4 (2)
O2—C1—C2—C38.5 (3)C6—C5—C4—C30.1 (3)
C8—C1—C2—C3−169.85 (18)O1—C3—C4—C5−179.18 (19)
O2—C1—C2—C7−172.14 (18)C2—C3—C4—C51.3 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1A···O20.821.842.558 (2)145
O1—H1A···O3i0.822.553.145 (2)130
O3—H3A···O20.821.812.532 (2)146
O3—H3A···O2i0.822.382.856 (2)118
C10—H10A···F2ii0.932.513.326 (3)147
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1A⋯O20.821.842.558 (2)145
O1—H1A⋯O3i 0.822.553.145 (2)130
O3—H3A⋯O20.821.812.532 (2)146
O3—H3A⋯O2i 0.822.382.856 (2)118
C10—H10A⋯F2ii 0.932.513.326 (3)147

Symmetry codes: (i) ; (ii) .

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4.  (2E)-3-(2-Fluoro-phen-yl)-1-(4-fluoro-phen-yl)prop-2-en-1-one.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-08-08

5.  Structure validation in chemical crystallography.

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