Literature DB >> 24527007

(1S*,2S*,4R*,5R*)-Cyclo-hexane-1,2,4,5-tetra-carb-oxy-lic acid.

Akira Uchida1, Masatoshi Hasegawa2, Shinya Yamaguchi3, Eiichiro Takezawa3, Atsushi Ishikawa3, Takashi Kagayama3.   

Abstract

The title compound, C10H12O8, a prospective raw material for colourless polyimides which are applied to electronic and microelectronic devices, lies about an inversion centre and the cyclo-hexane ring adopts a chair conformation. Two crystallographycally independent carb-oxy-lic acid groups on adjacent C atoms are in equatorial positions, resulting in a mutually trans conformation. In the crystal, O-H⋯O hydrogen bonds around an inversion centre and a threefold rotoinversion axis, respectively, form an inversion dimer with an R 2 (2)(8) motif and a trimer with an R 3 (3)(12) motif.

Entities:  

Year:  2013        PMID: 24527007      PMCID: PMC3914102          DOI: 10.1107/S1600536813033795

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to polyimides, see: Ando et al. (2010 ▶); Hasegawa et al. (2007 ▶, 2013 ▶); Hasegawa & Horie (2001 ▶). For related structures, see: Uchida et al. (2003 ▶, 2012 ▶).

Experimental

Crystal data

C10H12O8 M = 260.20 Trigonal, a = 17.6970 (6) Å c = 9.5455 (6) Å V = 2589.0 (2) Å3 Z = 9 Mo Kα radiation μ = 0.13 mm−1 T = 298 K 0.33 × 0.26 × 0.26 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.891, T max = 0.966 6439 measured reflections 1653 independent reflections 1388 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.119 S = 1.06 1653 reflections 90 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.38 e Å−3 Δρmin = −0.21 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT-Plus (Bruker, 2007 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2008 ▶); molecular graphics: ORTEPIII (Burnett & Johnson, 1996 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL2013. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813033795/is5327sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813033795/is5327Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536813033795/is5327Isup3.mol Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536813033795/is5327Isup4.cml Additional supporting information: crystallographic information; 3D view; checkCIF report
C10H12O8Dx = 1.502 Mg m3
Mr = 260.20Mo Kα radiation, λ = 0.71073 Å
Trigonal, R3Cell parameters from 2340 reflections
a = 17.6970 (6) Åθ = 2.3–30.0°
c = 9.5455 (6) ŵ = 0.13 mm1
V = 2589.0 (2) Å3T = 298 K
Z = 9Block, colourless
F(000) = 12240.33 × 0.26 × 0.26 mm
Bruker APEXII CCD area-detector diffractometer1388 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.019
φ and ω scansθmax = 30.0°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −24→21
Tmin = 0.891, Tmax = 0.966k = −20→24
6439 measured reflectionsl = −13→11
1653 independent reflections
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.041H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.119w = 1/[σ2(Fo2) + (0.0607P)2 + 1.9122P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max < 0.001
1653 reflectionsΔρmax = 0.38 e Å3
90 parametersΔρmin = −0.21 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
C10.51496 (8)0.07671 (7)−0.08154 (11)0.0279 (3)
H1A0.49290.1116−0.12420.034*
H1B0.57700.1045−0.10110.034*
C20.50063 (7)0.07293 (7)0.07787 (11)0.0233 (2)
H20.43830.04840.09690.028*
C30.53165 (7)0.01523 (7)0.14585 (11)0.0242 (2)
H30.59440.04140.12850.029*
C40.55013 (8)0.16503 (7)0.13456 (12)0.0283 (3)
C50.51702 (8)0.00882 (8)0.30236 (12)0.0267 (3)
O10.62253 (6)0.19739 (7)0.18327 (13)0.0471 (3)
H40.5352 (17)0.2558 (18)0.151 (3)0.083 (8)*
O20.50596 (8)0.20615 (8)0.12244 (15)0.0543 (3)
O30.46919 (7)0.03210 (7)0.35746 (9)0.0380 (3)
O40.55716 (7)−0.02417 (7)0.37025 (10)0.0400 (3)
H50.5485 (19)−0.0245 (19)0.467 (3)0.110 (10)*
U11U22U33U12U13U23
C10.0389 (6)0.0247 (5)0.0218 (5)0.0171 (5)0.0021 (4)0.0033 (4)
C20.0259 (5)0.0227 (5)0.0214 (5)0.0123 (4)0.0009 (4)0.0002 (4)
C30.0274 (5)0.0268 (5)0.0198 (5)0.0147 (4)0.0014 (4)0.0015 (4)
C40.0309 (6)0.0246 (5)0.0267 (5)0.0119 (5)0.0041 (4)0.0008 (4)
C50.0310 (6)0.0282 (5)0.0214 (5)0.0153 (5)−0.0010 (4)0.0009 (4)
O10.0302 (5)0.0342 (5)0.0672 (8)0.0088 (4)−0.0056 (5)−0.0095 (5)
O20.0559 (7)0.0333 (5)0.0820 (9)0.0285 (5)−0.0212 (6)−0.0187 (5)
O30.0517 (6)0.0540 (6)0.0237 (4)0.0380 (5)0.0042 (4)0.0031 (4)
O40.0531 (6)0.0611 (7)0.0238 (4)0.0420 (6)0.0015 (4)0.0059 (4)
C1—C3i1.5370 (16)C3—H30.9800
C1—C21.5386 (15)C4—O11.2049 (16)
C1—H1A0.9700C4—O21.3126 (16)
C1—H1B0.9700C5—O31.2295 (15)
C2—C41.5130 (15)C5—O41.2961 (14)
C2—C31.5251 (15)O2—H40.81 (3)
C2—H20.9800O4—H50.94 (3)
C3—C51.5108 (15)
C3i—C1—C2111.06 (9)C5—C3—C1i109.53 (9)
C3i—C1—H1A109.4C2—C3—C1i110.89 (9)
C2—C1—H1A109.4C5—C3—H3108.3
C3i—C1—H1B109.4C2—C3—H3108.3
C2—C1—H1B109.4C1i—C3—H3108.3
H1A—C1—H1B108.0O1—C4—O2123.84 (12)
C4—C2—C3111.15 (9)O1—C4—C2123.74 (11)
C4—C2—C1108.23 (9)O2—C4—C2112.41 (11)
C3—C2—C1110.07 (9)O3—C5—O4124.14 (11)
C4—C2—H2109.1O3—C5—C3121.25 (10)
C3—C2—H2109.1O4—C5—C3114.60 (10)
C1—C2—H2109.1C4—O2—H4109.5 (18)
C5—C3—C2111.43 (9)C5—O4—H5111.8 (17)
C3i—C1—C2—C4178.45 (9)C1—C2—C4—O1−95.39 (14)
C3i—C1—C2—C356.81 (13)C3—C2—C4—O2−155.53 (11)
C4—C2—C3—C561.11 (12)C1—C2—C4—O283.49 (13)
C1—C2—C3—C5−179.00 (9)C2—C3—C5—O314.47 (16)
C4—C2—C3—C1i−176.60 (9)C1i—C3—C5—O3−108.61 (13)
C1—C2—C3—C1i−56.70 (13)C2—C3—C5—O4−166.81 (10)
C3—C2—C4—O125.59 (16)C1i—C3—C5—O470.12 (13)
D—H···AD—HH···AD···AD—H···A
O2—H4···O1ii0.81 (3)1.93 (3)2.705 (2)160 (3)
O4—H5···O3iii0.94 (3)1.70 (3)2.632 (1)176 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O2—H4⋯O1i 0.81 (3)1.93 (3)2.705 (2)160 (3)
O4—H5⋯O3ii 0.94 (3)1.70 (3)2.632 (1)176 (3)

Symmetry codes: (i) ; (ii) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Cis,cis,cis-1,2,4,5-cyclohexanetetracarboxylic acid and its dianhydride.

Authors:  Akira Uchida; Masatoshi Hasegawa; Hiroshi Manami
Journal:  Acta Crystallogr C       Date:  2003-07-12       Impact factor: 1.172

3.  (1R*,2S*,4S*,5R*)-Cyclo-hexane-1,2:4,5-tetra-carb-oxy-lic dianhydride.

Authors:  Akira Uchida; Masatoshi Hasegawa; Eiichiro Takezawa; Shinya Yamaguchi; Atsushi Ishikawa; Takashi Kagayama
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-04

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.