Literature DB >> 24526933

Poly[(μ6-benzene-1,3,5-tri-carboxyl-ato-κ(6) O (1):O (1'):O (3):O (3'):O (5):O (5'))tris-(N,N-di-methyl-formamide-κO)tris-(μ3-formato-κ(3) O:O:O')trizinc(II)].

Jaeung Sim1, Taemin Kim1, Jin Kuk Yang1.   

Abstract

The asymmetric unit of the title compound, [Zn3(HCO2)3(C9H3O6)(C3H7NO)3] n , contains one Zn ion, one formate ligand, one N,N-di-methyl-formamide (DMF) ligand and one-third of a benzene-1,3,5-tri-carboxyl-ate (btc) ligand situated on a crystallographic 3 axis. Each Zn(II) atom is coordinated by one O atom from a DMF ligand, two O atoms from two btc ligands and three O atoms from three formate ligands in a distorted octa-hedral geometry. The Zn(II) atoms are connected by the formate and btc ligands, forming hexanuclear cores, which are linked by btc ligands, constructing a two-dimensional layered network along the ab plane.

Entities:  

Year:  2013        PMID: 24526933      PMCID: PMC3919546          DOI: 10.1107/S1600536813028687

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to compounds with metal-organic frameworks, see: Eddaoudi et al. (2000 ▶)·The crystal structures of isotypic compounds with NiII and MgII were reported by Maniam & Stock (2011 ▶) and Yeh et al. (2010 ▶), respectively.

Experimental

Crystal data

[Zn3(HCO2)3(C9H3O6)(C3H7NO)3] M = 757.56 Trigonal, a = 13.8594 (17) Å c = 8.0100 (14) Å V = 1332.5 (4) Å3 Z = 2 Mo Kα radiation μ = 2.76 mm−1 T = 153 K 0.10 × 0.02 × 0.02 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2003 ▶) T min = 0.770, T max = 0.947 7964 measured reflections 2027 independent reflections 1563 reflections with I > 2σ(I) R int = 0.153

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.089 S = 0.81 2027 reflections 127 parameters H-atom parameters constrained Δρmax = 0.72 e Å−3 Δρmin = −0.79 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: CrystalMaker (CrystalMaker, 2013 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813028687/cv5429sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813028687/cv5429Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn3(HCO2)3(C9H3O6)(C3H7NO)3]Dx = 1.888 Mg m3
Mr = 757.56Mo Kα radiation, λ = 0.71073 Å
Trigonal, P3Cell parameters from 2269 reflections
Hall symbol: -P 3θ = 2.4–28.2°
a = 13.8594 (17) ŵ = 2.76 mm1
c = 8.0100 (14) ÅT = 153 K
V = 1332.5 (4) Å3Column, colorless
Z = 20.10 × 0.02 × 0.02 mm
F(000) = 768
Bruker SMART APEX CCD diffractometer2027 independent reflections
Radiation source: fine-focus sealed tube1563 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.153
phi and ω scansθmax = 27.5°, θmin = 1.7°
Absorption correction: multi-scan (SADABS; Sheldrick, 2003)h = −17→17
Tmin = 0.770, Tmax = 0.947k = −11→18
7964 measured reflectionsl = −9→10
Refinement on F20 restraints
Least-squares matrix: full0 constraints
R[F2 > 2σ(F2)] = 0.040H-atom parameters constrained
wR(F2) = 0.089w = 1/[σ2(Fo2) + (0.0317P)2 + 0.1686P] where P = (Fo2 + 2Fc2)/3
S = 0.81(Δ/σ)max < 0.001
2027 reflectionsΔρmax = 0.72 e Å3
127 parametersΔρmin = −0.79 e Å3
Geometry. Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R– factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn10.01272 (3)0.23313 (3)0.39911 (5)0.01217 (12)
O1−0.25265 (17)0.12229 (17)0.4805 (3)0.0160 (5)
O2−0.10070 (17)0.28429 (17)0.4230 (3)0.0149 (5)
O3−0.05005 (17)0.13366 (17)0.6162 (3)0.0140 (5)
O40.10436 (18)0.19215 (19)0.7680 (3)0.0162 (5)
C1−0.2019 (3)0.2249 (2)0.4582 (4)0.0115 (6)
C2−0.2697 (3)0.2816 (2)0.4691 (4)0.0113 (6)
C3−0.3856 (3)0.2180 (3)0.4700 (3)0.0130 (7)
H3−0.42130.13900.47120.016*
C40.0026 (3)0.1477 (3)0.7513 (4)0.0140 (7)
H4−0.04080.12140.85020.017*
O50.07684 (19)0.32946 (18)0.1759 (3)0.0198 (5)
N10.0391 (2)0.3985 (2)−0.0540 (3)0.0204 (6)
C50.0119 (3)0.3253 (3)0.0664 (4)0.0203 (8)
H5−0.06260.26510.06990.024*
C60.1529 (3)0.4921 (3)−0.0652 (5)0.0286 (9)
H6A0.18900.50510.04420.043*
H6B0.15140.5590−0.10030.043*
H6C0.19480.4749−0.14700.043*
C7−0.0372 (3)0.3837 (3)−0.1897 (4)0.0294 (9)
H7A−0.10920.3163−0.16970.044*
H7B−0.00610.3762−0.29560.044*
H7C−0.04770.4485−0.19510.044*
U11U22U33U12U13U23
Zn10.0082 (2)0.0087 (2)0.0197 (2)0.00431 (16)0.00015 (15)0.00033 (15)
O10.0128 (12)0.0101 (11)0.0253 (13)0.0060 (10)−0.0020 (10)0.0021 (10)
O20.0088 (11)0.0097 (11)0.0276 (12)0.0056 (9)0.0017 (10)−0.0001 (10)
O30.0093 (11)0.0117 (11)0.0179 (11)0.0029 (9)−0.0024 (9)0.0013 (9)
O40.0109 (12)0.0182 (12)0.0194 (12)0.0072 (10)−0.0014 (10)−0.0016 (10)
C10.0109 (16)0.0078 (15)0.0143 (16)0.0036 (13)−0.0041 (13)−0.0021 (13)
C20.0106 (15)0.0107 (15)0.0129 (15)0.0056 (13)−0.0010 (13)0.0011 (13)
C30.0135 (16)0.0102 (16)0.0144 (16)0.0053 (13)0.0001 (13)0.0008 (13)
C40.0128 (16)0.0087 (15)0.0205 (17)0.0053 (14)0.0010 (14)−0.0004 (13)
O50.0162 (12)0.0180 (12)0.0221 (13)0.0063 (11)0.0026 (10)0.0074 (10)
N10.0216 (16)0.0224 (16)0.0208 (15)0.0137 (14)−0.0002 (13)0.0020 (13)
C50.0178 (18)0.0160 (18)0.027 (2)0.0084 (15)0.0040 (16)0.0004 (15)
C60.029 (2)0.028 (2)0.028 (2)0.0127 (18)0.0057 (17)0.0075 (17)
C70.036 (2)0.038 (2)0.0217 (19)0.025 (2)−0.0024 (18)−0.0004 (17)
Zn1—O1i2.028 (2)C2—C31.394 (4)
Zn1—O22.031 (2)C3—C2iv1.380 (4)
Zn1—O4ii2.105 (2)C3—H30.9500
Zn1—O3i2.108 (2)C4—H40.9500
Zn1—O32.117 (2)O5—C51.237 (4)
Zn1—O52.140 (2)N1—C51.311 (4)
O1—C11.245 (3)N1—C71.458 (4)
O1—Zn1ii2.028 (2)N1—C61.460 (5)
O2—C11.253 (4)C5—H50.9500
O3—C41.265 (4)C6—H6A0.9800
O3—Zn1ii2.108 (2)C6—H6B0.9800
O4—C41.232 (4)C6—H6C0.9800
O4—Zn1i2.105 (2)C7—H7A0.9800
C1—C21.499 (4)C7—H7B0.9800
C2—C3iii1.380 (4)C7—H7C0.9800
O1i—Zn1—O287.25 (9)C3—C2—C1119.7 (3)
O1i—Zn1—O4ii168.88 (9)C2iv—C3—C2120.1 (3)
O2—Zn1—O4ii93.23 (9)C2iv—C3—H3120.0
O1i—Zn1—O3i90.61 (8)C2—C3—H3120.0
O2—Zn1—O3i177.54 (9)O4—C4—O3126.7 (3)
O4ii—Zn1—O3i89.09 (8)O4—C4—H4116.6
O1i—Zn1—O396.06 (9)O3—C4—H4116.6
O2—Zn1—O390.70 (8)C5—O5—Zn1119.8 (2)
O4ii—Zn1—O395.05 (8)C5—N1—C7122.1 (3)
O3i—Zn1—O388.32 (10)C5—N1—C6119.8 (3)
O1i—Zn1—O585.20 (9)C7—N1—C6117.7 (3)
O2—Zn1—O590.77 (9)O5—C5—N1124.4 (3)
O4ii—Zn1—O583.68 (8)O5—C5—H5117.8
O3i—Zn1—O590.26 (9)N1—C5—H5117.8
O3—Zn1—O5178.11 (9)N1—C6—H6A109.5
C1—O1—Zn1ii135.5 (2)N1—C6—H6B109.5
C1—O2—Zn1126.83 (19)H6A—C6—H6B109.5
C4—O3—Zn1ii120.2 (2)N1—C6—H6C109.5
C4—O3—Zn1125.8 (2)H6A—C6—H6C109.5
Zn1ii—O3—Zn1113.73 (10)H6B—C6—H6C109.5
C4—O4—Zn1i132.5 (2)N1—C7—H7A109.5
O1—C1—O2126.2 (3)N1—C7—H7B109.5
O1—C1—C2116.5 (3)H7A—C7—H7B109.5
O2—C1—C2117.3 (3)N1—C7—H7C109.5
C3iii—C2—C3119.9 (3)H7A—C7—H7C109.5
C3iii—C2—C1120.3 (3)H7B—C7—H7C109.5
Zn1ii—O1—C1—O242.6 (5)C3iii—C2—C3—C2iv1.0 (6)
Zn1ii—O1—C1—C2−139.5 (2)C1—C2—C3—C2iv−175.8 (2)
Zn1—O2—C1—O1−2.2 (5)Zn1i—O4—C4—O3−21.4 (5)
Zn1—O2—C1—C2179.99 (19)Zn1ii—O3—C4—O4159.8 (3)
O1—C1—C2—C3iii170.7 (3)Zn1—O3—C4—O4−26.7 (4)
O2—C1—C2—C3iii−11.3 (4)Zn1—O5—C5—N1163.2 (2)
O1—C1—C2—C3−12.5 (4)C7—N1—C5—O5173.5 (3)
O2—C1—C2—C3165.5 (3)C6—N1—C5—O50.5 (5)
  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Investigation of porous Ni-based metal-organic frameworks containing paddle-wheel type inorganic building units via high-throughput methods.

Authors:  Palanikumar Maniam; Norbert Stock
Journal:  Inorg Chem       Date:  2011-05-03       Impact factor: 5.165

3.  Poly[(μ(6)-benzene-1,3,5-tricarboxyl-ato-κO:O:O:O:O:O)tris-(N,N-dimethyl-formamide-κO)tris-(μ(3)-formato-κO:O')trimagnesium(II)].

Authors:  Chun-Ting Yeh; Hsin-Kuan Liu; Chia-Jing Lin; Chia-Her Lin
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-09-25
  3 in total

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