Literature DB >> 24526931

Poly[(μ3-5-tert-butyl-benzene-1,3-di-carboxyl-ato)di-pyridine-cobalt(II)].

Kyungkyou Noh1, Jaheon Kim1.   

Abstract

In the title compound, [Co(C12H12O4)(C5H5N)2] n , the Co(II) cation is coordinated by four O atoms from three 5-tert-butyl-benzene-1,3-di-carboxyl-ate anions and two N atoms from pyridine mol-ecules in a distorted octa-hedral geometry. One carboxyl-ate group of the anionic ligand chelates a Co(II) cation while another carboxyl-ate group bridges two Co(II) cations, resulting in a polymeric layer parallel to (101). Weak C-H⋯O hydrogen bonds occur between adjacent polymeric layers. In the crystal, one of pyridine mol-ecules is equally disordered over two positions.

Entities:  

Year:  2013        PMID: 24526931      PMCID: PMC3919544          DOI: 10.1107/S1600536813026640

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For metal-organic frameworks composed of cobalt cations and 5-tert-butyl­benzene-1,3-di­carboxyl­ate ligands without additional bridging ligands, see: Chen et al. (2011 ▶); Du et al. (2009 ▶); Ma et al. (2009 ▶); Qin & Ju (2010 ▶). For a copper(II) complex with 5-tert-butylbenzene-1,3-­dicarboxyl­ate ligand, see: Li & Zhou (2010 ▶).

Experimental

Crystal data

[Co(C12H12O4)(C5H5N)2] M = 437.34 Monoclinic, a = 9.7357 (3) Å b = 15.6699 (6) Å c = 13.0764 (5) Å β = 94.791 (1)° V = 1987.93 (12) Å3 Z = 4 Mo Kα radiation μ = 0.90 mm−1 T = 173 K 0.50 × 0.40 × 0.30 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.663, T max = 0.775 12370 measured reflections 4580 independent reflections 3843 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.135 S = 1.11 4580 reflections 314 parameters 66 restraints H-atom parameters constrained Δρmax = 1.25 e Å−3 Δρmin = −0.64 e Å−3 Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: CrystalMaker (CrystalMaker Software, 2013 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813026640/xu5741sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813026640/xu5741Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Co(C12H12O4)(C5H5N)2]F(000) = 908
Mr = 437.34Dx = 1.461 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 6406 reflections
a = 9.7357 (3) Åθ = 2.5–28.2°
b = 15.6699 (6) ŵ = 0.90 mm1
c = 13.0764 (5) ÅT = 173 K
β = 94.791 (1)°Block, violet
V = 1987.93 (12) Å30.50 × 0.40 × 0.30 mm
Z = 4
Bruker SMART APEX CCD diffractometer4580 independent reflections
Radiation source: fine-focus sealed tube3843 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.021
phi and ω scansθmax = 27.9°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −12→12
Tmin = 0.663, Tmax = 0.775k = −17→20
12370 measured reflectionsl = −17→13
Refinement on F266 restraints
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.049w = 1/[σ2(Fo2) + (0.059P)2 + 3.5707P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.135(Δ/σ)max = 0.001
S = 1.11Δρmax = 1.25 e Å3
4580 reflectionsΔρmin = −0.64 e Å3
314 parameters
Geometry. Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R– factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Co10.44382 (4)0.12814 (2)0.54417 (3)0.02396 (13)
O10.4499 (3)0.01260 (13)0.61177 (17)0.0394 (5)
O20.4464 (2)−0.12667 (11)0.58392 (15)0.0263 (4)
O30.1852 (2)−0.30891 (12)0.83448 (16)0.0342 (5)
O40.1101 (2)−0.24206 (13)0.96689 (15)0.0305 (4)
C10.3528 (3)−0.07399 (16)0.73420 (19)0.0207 (5)
C20.3038 (3)−0.15329 (16)0.76379 (19)0.0210 (5)
H20.3153−0.20240.72280.025*
C30.2379 (3)−0.15960 (17)0.8543 (2)0.0234 (5)
C40.2262 (3)−0.08775 (18)0.9164 (2)0.0261 (5)
H40.1828−0.09320.97850.031*
C50.2770 (3)−0.00814 (17)0.8893 (2)0.0244 (5)
C60.3373 (3)−0.00254 (16)0.7962 (2)0.0236 (5)
H60.36870.05140.77440.028*
C70.4206 (3)−0.06185 (16)0.63520 (19)0.0203 (5)
C80.1748 (3)−0.24228 (17)0.8864 (2)0.0257 (5)
C90.2610 (3)0.07170 (19)0.9557 (2)0.0326 (6)
C100.3841 (5)0.1310 (3)0.9510 (4)0.0771 (17)
H10A0.37730.17771.00010.116*
H10B0.38500.15440.88160.116*
H10C0.46940.09900.96830.116*
C110.1368 (5)0.1215 (3)0.9076 (5)0.0868 (19)
H11A0.05370.08630.90850.130*
H11B0.15200.13620.83650.130*
H11C0.12520.17390.94690.130*
C120.2442 (10)0.0500 (3)1.0652 (3)0.127 (3)
H12A0.32340.01621.09300.190*
H12B0.15950.01681.06930.190*
H12C0.23860.10261.10510.190*
N10.6310 (3)0.16214 (15)0.63878 (19)0.0302 (5)
C130.6260 (4)0.1716 (3)0.7395 (3)0.0621 (12)
H130.54180.15850.76780.074*
C140.7352 (5)0.1993 (4)0.8058 (3)0.0688 (13)
H140.72550.20450.87720.083*
C150.8549 (4)0.2186 (3)0.7673 (3)0.0533 (10)
H150.93110.23870.81080.064*
C160.8649 (5)0.2088 (4)0.6645 (4)0.0734 (15)
H160.94880.22110.63530.088*
C170.7502 (4)0.1806 (3)0.6033 (3)0.0550 (10)
H170.75830.17430.53180.066*
N20.2472 (9)0.1037 (5)0.4542 (7)0.0300 (18)0.5
C180.2420 (11)0.0415 (5)0.3860 (6)0.055 (3)0.5
H180.32220.00710.38510.066*0.5
C190.1310 (12)0.0203 (7)0.3143 (8)0.091 (3)0.5
H190.1370−0.02600.26790.109*0.5
C200.0168 (10)0.0680 (5)0.3141 (7)0.067 (2)0.5
H20−0.06070.05620.26710.080*0.5
C210.0130 (8)0.1349 (5)0.3834 (7)0.082 (4)0.5
H21−0.06640.16990.38550.098*0.5
C220.1299 (8)0.1485 (5)0.4496 (7)0.068 (3)0.5
H220.12620.19450.49670.082*0.5
N2A0.2579 (10)0.0868 (5)0.4638 (8)0.038 (2)0.5
C18A0.2377 (10)0.0736 (5)0.3620 (8)0.074 (4)0.5
H18A0.31560.08200.32390.089*0.5
C19A0.1159 (12)0.0489 (5)0.3055 (10)0.091 (3)0.5
H19A0.11050.04100.23320.109*0.5
C20A0.0078 (12)0.0374 (6)0.3605 (8)0.079 (3)0.5
H20A−0.07780.02060.32630.094*0.5
C21A0.0159 (9)0.0488 (6)0.4613 (7)0.109 (6)0.5
H21A−0.06210.04040.49910.131*0.5
C22A0.1429 (8)0.0734 (5)0.5102 (7)0.072 (3)0.5
H22A0.14770.08110.58240.086*0.5
U11U22U33U12U13U23
Co10.0331 (2)0.01763 (19)0.0226 (2)−0.00231 (14)0.01078 (14)−0.00066 (13)
O10.0653 (16)0.0189 (10)0.0373 (12)−0.0033 (10)0.0248 (11)0.0037 (8)
O20.0347 (10)0.0209 (9)0.0248 (9)−0.0011 (8)0.0112 (8)−0.0027 (7)
O30.0502 (13)0.0207 (10)0.0335 (11)−0.0038 (9)0.0152 (9)0.0009 (8)
O40.0393 (11)0.0279 (10)0.0258 (10)−0.0057 (8)0.0123 (8)0.0022 (8)
C10.0210 (11)0.0217 (12)0.0195 (11)0.0009 (9)0.0027 (9)0.0011 (9)
C20.0230 (12)0.0188 (11)0.0213 (12)0.0006 (9)0.0034 (10)−0.0010 (9)
C30.0245 (12)0.0228 (12)0.0234 (13)−0.0011 (10)0.0039 (10)0.0021 (10)
C40.0285 (13)0.0279 (14)0.0226 (13)0.0004 (11)0.0070 (10)0.0005 (10)
C50.0267 (13)0.0238 (13)0.0229 (12)0.0016 (10)0.0031 (10)−0.0027 (10)
C60.0271 (13)0.0197 (12)0.0242 (13)−0.0006 (10)0.0035 (10)0.0008 (10)
C70.0199 (11)0.0198 (12)0.0213 (12)0.0009 (9)0.0035 (9)0.0011 (9)
C80.0302 (14)0.0231 (13)0.0243 (13)−0.0022 (10)0.0046 (11)0.0044 (10)
C90.0412 (17)0.0268 (14)0.0315 (15)−0.0020 (12)0.0128 (12)−0.0084 (11)
C100.079 (3)0.058 (3)0.100 (4)−0.031 (2)0.045 (3)−0.053 (3)
C110.067 (3)0.070 (3)0.121 (5)0.031 (2)−0.005 (3)−0.051 (3)
C120.307 (11)0.044 (3)0.036 (2)−0.032 (4)0.056 (4)−0.018 (2)
N10.0379 (13)0.0244 (11)0.0284 (12)−0.0031 (10)0.0042 (10)0.0017 (9)
C130.052 (2)0.102 (4)0.0326 (19)−0.022 (2)0.0082 (16)−0.013 (2)
C140.069 (3)0.100 (4)0.036 (2)−0.016 (3)−0.0039 (19)−0.017 (2)
C150.056 (2)0.048 (2)0.052 (2)−0.0120 (17)−0.0178 (18)0.0064 (17)
C160.048 (2)0.112 (4)0.059 (3)−0.029 (3)−0.005 (2)0.024 (3)
C170.043 (2)0.086 (3)0.0362 (19)−0.014 (2)0.0033 (15)0.0108 (19)
N20.023 (3)0.025 (3)0.042 (3)0.007 (2)0.006 (2)0.002 (3)
C180.052 (5)0.043 (4)0.066 (7)−0.020 (4)−0.020 (5)0.018 (4)
C190.054 (4)0.151 (10)0.065 (4)−0.018 (5)−0.006 (3)0.000 (5)
C200.056 (4)0.067 (4)0.075 (4)0.009 (3)−0.015 (4)−0.004 (4)
C210.040 (4)0.076 (6)0.123 (9)0.027 (4)−0.037 (5)−0.056 (6)
C220.057 (5)0.061 (5)0.084 (7)0.016 (4)−0.008 (5)−0.033 (5)
N2A0.032 (4)0.030 (4)0.054 (4)0.009 (3)0.011 (3)0.005 (3)
C18A0.032 (4)0.144 (13)0.046 (5)−0.005 (7)0.003 (4)−0.023 (8)
C19A0.054 (4)0.151 (10)0.065 (4)−0.018 (5)−0.006 (3)0.000 (5)
C20A0.083 (5)0.081 (5)0.073 (5)0.009 (4)0.015 (4)0.013 (4)
C21A0.051 (5)0.203 (16)0.078 (7)−0.065 (8)0.030 (5)−0.050 (9)
C22A0.053 (5)0.103 (8)0.061 (5)−0.022 (5)0.016 (4)−0.012 (5)
Co1—O12.014 (2)C12—H12B0.9800
Co1—O2i2.0608 (19)C12—H12C0.9800
Co1—O3ii2.324 (2)N1—C171.317 (4)
Co1—O4ii2.103 (2)N1—C131.330 (4)
Co1—N12.182 (3)C13—C141.384 (5)
Co1—N22.195 (9)C13—H130.9500
Co1—N2A2.117 (11)C14—C151.342 (6)
O1—C71.245 (3)C14—H140.9500
O2—C71.254 (3)C15—C161.365 (6)
O2—Co1i2.0608 (19)C15—H150.9500
O3—C81.254 (3)C16—C171.391 (5)
O3—Co1iii2.324 (2)C16—H160.9500
O4—C81.271 (3)C17—H170.9500
O4—Co1iii2.102 (2)N2—C221.337 (10)
C1—C61.398 (4)N2—C181.320 (10)
C1—C21.397 (3)C18—C191.410 (11)
C1—C71.513 (3)C18—H180.9500
C2—C31.396 (4)C19—C201.340 (12)
C2—H20.9500C19—H190.9500
C3—C41.398 (4)C20—C211.388 (10)
C3—C81.508 (4)C20—H200.9500
C4—C51.398 (4)C21—C221.388 (10)
C4—H40.9500C21—H210.9500
C5—C61.399 (4)C22—H220.9500
C5—C91.538 (4)N2A—C22A1.333 (11)
C6—H60.9500N2A—C18A1.346 (11)
C9—C121.494 (5)C18A—C19A1.398 (11)
C9—C101.522 (5)C18A—H18A0.9500
C9—C111.529 (6)C19A—C20A1.336 (12)
C10—H10A0.9800C19A—H19A0.9500
C10—H10B0.9800C20A—C21A1.325 (11)
C10—H10C0.9800C20A—H20A0.9500
C11—H11A0.9800C21A—C22A1.398 (10)
C11—H11B0.9800C21A—H21A0.9500
C11—H11C0.9800C22A—H22A0.9500
C12—H12A0.9800
O1—Co1—O2i110.40 (8)H11A—C11—H11C109.5
O1—Co1—O4ii153.91 (8)H11B—C11—H11C109.5
O2i—Co1—O4ii95.64 (7)C9—C12—H12A109.5
O1—Co1—N2A86.3 (2)C9—C12—H12B109.5
O2i—Co1—N2A94.2 (3)H12A—C12—H12B109.5
O4ii—Co1—N2A93.6 (2)C9—C12—H12C109.5
O1—Co1—N188.74 (10)H12A—C12—H12C109.5
O2i—Co1—N189.90 (9)H12B—C12—H12C109.5
O4ii—Co1—N189.70 (9)C17—N1—C13115.5 (3)
N2A—Co1—N1174.4 (2)C17—N1—Co1124.9 (2)
O1—Co1—N294.1 (2)C13—N1—Co1119.4 (2)
O2i—Co1—N292.9 (2)N1—C13—C14124.4 (4)
O4ii—Co1—N286.0 (2)N1—C13—H13117.8
N1—Co1—N2175.1 (2)C14—C13—H13117.8
O1—Co1—O3ii94.57 (8)C15—C14—C13118.8 (4)
O2i—Co1—O3ii154.98 (7)C15—C14—H14120.6
O4ii—Co1—O3ii59.36 (7)C13—C14—H14120.6
N2A—Co1—O3ii88.9 (3)C14—C15—C16118.7 (4)
N1—Co1—O3ii89.01 (9)C14—C15—H15120.7
N2—Co1—O3ii86.7 (2)C16—C15—H15120.7
C7—O1—Co1162.0 (2)C15—C16—C17118.8 (4)
C7—O2—Co1i125.77 (16)C15—C16—H16120.6
C8—O3—Co1iii84.88 (16)C17—C16—H16120.6
C8—O4—Co1iii94.51 (17)N1—C17—C16123.8 (4)
C6—C1—C2119.7 (2)N1—C17—H17118.1
C6—C1—C7118.1 (2)C16—C17—H17118.1
C2—C1—C7122.1 (2)C22—N2—C18111.9 (8)
C3—C2—C1119.3 (2)C22—N2—Co1129.5 (6)
C3—C2—H2120.3C18—N2—Co1118.3 (7)
C1—C2—H2120.3N2—C18—C19127.5 (10)
C2—C3—C4120.0 (2)N2—C18—H18116.3
C2—C3—C8121.6 (2)C19—C18—H18116.3
C4—C3—C8118.4 (2)C20—C19—C18117.4 (11)
C5—C4—C3121.6 (2)C20—C19—H19121.3
C5—C4—H4119.2C18—C19—H19121.3
C3—C4—H4119.2C19—C20—C21119.1 (9)
C4—C5—C6117.4 (2)C19—C20—H20120.4
C4—C5—C9121.9 (2)C21—C20—H20120.4
C6—C5—C9120.7 (2)C20—C21—C22117.3 (7)
C1—C6—C5121.9 (2)C20—C21—H21121.4
C1—C6—H6119.1C22—C21—H21121.4
C5—C6—H6119.1N2—C22—C21126.9 (8)
O1—C7—O2124.5 (2)N2—C22—H22116.6
O1—C7—C1117.0 (2)C21—C22—H22116.6
O2—C7—C1118.5 (2)C22A—N2A—C18A111.5 (9)
O3—C8—O4121.2 (2)C22A—N2A—Co1122.6 (8)
O3—C8—C3120.7 (2)C18A—N2A—Co1125.9 (7)
O4—C8—C3118.0 (2)N2A—C18A—C19A127.8 (9)
C12—C9—C10109.1 (4)N2A—C18A—H18A116.1
C12—C9—C11111.4 (5)C19A—C18A—H18A116.1
C10—C9—C11105.7 (4)C20A—C19A—C18A115.1 (11)
C12—C9—C5112.3 (3)C20A—C19A—H19A122.5
C10—C9—C5110.9 (3)C18A—C19A—H19A122.5
C11—C9—C5107.3 (3)C19A—C20A—C21A122.3 (11)
C9—C10—H10A109.5C19A—C20A—H20A118.9
C9—C10—H10B109.5C21A—C20A—H20A118.9
H10A—C10—H10B109.5C20A—C21A—C22A117.9 (9)
C9—C10—H10C109.5C20A—C21A—C21Aiv115.4 (7)
H10A—C10—H10C109.5C20A—C21A—H21A121.0
H10B—C10—H10C109.5C22A—C21A—H21A121.0
C9—C11—H11A109.5N2A—C22A—C21A125.4 (9)
C9—C11—H11B109.5N2A—C22A—H22A117.3
H11A—C11—H11B109.5C21A—C22A—H22A117.3
C9—C11—H11C109.5
C6—C1—C2—C31.1 (4)C6—C5—C9—C12−159.0 (5)
C7—C1—C2—C3−177.7 (2)C4—C5—C9—C10146.6 (4)
C1—C2—C3—C4−2.6 (4)C6—C5—C9—C10−36.7 (4)
C1—C2—C3—C8175.9 (2)C4—C5—C9—C11−98.4 (4)
C2—C3—C4—C51.3 (4)C6—C5—C9—C1178.3 (4)
C8—C3—C4—C5−177.3 (3)C17—N1—C13—C140.4 (7)
C3—C4—C5—C61.4 (4)Co1—N1—C13—C14−174.9 (4)
C3—C4—C5—C9178.2 (3)N1—C13—C14—C150.3 (9)
C2—C1—C6—C51.7 (4)C13—C14—C15—C16−1.0 (8)
C7—C1—C6—C5−179.4 (2)C14—C15—C16—C171.0 (8)
C4—C5—C6—C1−2.9 (4)C13—N1—C17—C16−0.4 (7)
C9—C5—C6—C1−179.8 (3)Co1—N1—C17—C16174.5 (4)
Co1—O1—C7—O279.6 (7)C15—C16—C17—N1−0.3 (8)
Co1—O1—C7—C1−102.2 (6)C22—N2—C18—C19−0.02 (6)
Co1i—O2—C7—O15.1 (4)Co1—N2—C18—C19−173.7 (5)
Co1i—O2—C7—C1−172.99 (16)N2—C18—C19—C200.03 (7)
C6—C1—C7—O1−4.8 (4)C18—C19—C20—C21−0.09 (15)
C2—C1—C7—O1174.1 (3)C19—C20—C21—C220.14 (19)
C6—C1—C7—O2173.5 (2)C18—N2—C22—C210.08 (16)
C2—C1—C7—O2−7.7 (4)Co1—N2—C22—C21172.8 (6)
Co1iii—O3—C8—O40.3 (3)C20—C21—C22—N2−0.1 (2)
Co1iii—O3—C8—C3−179.1 (2)C22A—N2A—C18A—C19A0.04 (6)
Co1iii—O4—C8—O3−0.3 (3)Co1—N2A—C18A—C19A−177.9 (5)
Co1iii—O4—C8—C3179.0 (2)N2A—C18A—C19A—C20A−0.02 (7)
C2—C3—C8—O33.1 (4)C18A—C19A—C20A—C21A0.09 (15)
C4—C3—C8—O3−178.4 (3)C19A—C20A—C21A—C22A−0.2 (2)
C2—C3—C8—O4−176.3 (3)C18A—N2A—C22A—C21A−0.12 (15)
C4—C3—C8—O42.2 (4)Co1—N2A—C22A—C21A177.9 (5)
C4—C5—C9—C1224.3 (5)C20A—C21A—C22A—N2A0.2 (2)
D—H···AD—HH···AD···AD—H···A
C14—H14···O4v0.952.553.287 (5)134
Table 1

Selected bond lengths (Å)

Co1—O12.014 (2)
Co1—O2i 2.0608 (19)
Co1—O3ii 2.324 (2)
Co1—O4ii 2.103 (2)
Co1—N12.182 (3)
Co1—N22.195 (9)
Co1—N2A 2.117 (11)

Symmetry codes: (i) ; (ii) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C14—H14⋯O4iii 0.952.553.287 (5)134

Symmetry code: (iii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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Authors:  Li-Juan Chen; Jiang-Bo Su; Rong-Bin Huang; Shen Lin; Ming-Xing Yang; Hua Huang
Journal:  Dalton Trans       Date:  2011-08-22       Impact factor: 4.390

3.  Bridging-ligand-substitution strategy for the preparation of metal-organic polyhedra.

Authors:  Jian-Rong Li; Hong-Cai Zhou
Journal:  Nat Chem       Date:  2010-08-22       Impact factor: 24.427

  3 in total
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1.  Coordination polymers of 5-substituted isophthalic acid.

Authors:  Laura J McCormick; Samuel A Morris; Alexandra M Z Slawin; Simon J Teat; Russell E Morris
Journal:  CrystEngComm       Date:  2015-12-21       Impact factor: 3.545

  1 in total

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