Literature DB >> 24522265

'Geoarchaeote NAG1' is a deeply rooting lineage of the archaeal order Thermoproteales rather than a new phylum.

Lionel Guy1, Anja Spang1, Jimmy H Saw1, Thijs J G Ettema1.   

Abstract

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Year:  2014        PMID： 24522265      PMCID： PMC4069404          DOI： 10.1038/ismej.2014.6

Source DB:  PubMed          Journal:  ISME J        ISSN： 1751-7362            Impact factor:   10.302


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  18 in total

1.  Distinct gene set in two different lineages of ammonia-oxidizing archaea supports the phylum Thaumarchaeota.

Authors:  Anja Spang; Roland Hatzenpichler; Céline Brochier-Armanet; Thomas Rattei; Patrick Tischler; Eva Spieck; Wolfgang Streit; David A Stahl; Michael Wagner; Christa Schleper
Journal:  Trends Microbiol       Date:  2010-07-02       Impact factor: 17.079

2.  The archaebacterial origin of eukaryotes.

Authors:  Cymon J Cox; Peter G Foster; Robert P Hirt; Simon R Harris; T Martin Embley
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-10       Impact factor: 11.205

3.  Insights into the phylogeny and coding potential of microbial dark matter.

Authors:  Christian Rinke; Patrick Schwientek; Alexander Sczyrba; Natalia N Ivanova; Iain J Anderson; Jan-Fang Cheng; Aaron Darling; Stephanie Malfatti; Brandon K Swan; Esther A Gies; Jeremy A Dodsworth; Brian P Hedlund; George Tsiamis; Stefan M Sievert; Wen-Tso Liu; Jonathan A Eisen; Steven J Hallam; Nikos C Kyrpides; Ramunas Stepanauskas; Edward M Rubin; Philip Hugenholtz; Tanja Woyke
Journal:  Nature       Date:  2013-07-14       Impact factor: 49.962

4.  An improved general amino acid replacement matrix.

Authors:  Si Quang Le; Olivier Gascuel
Journal:  Mol Biol Evol       Date:  2008-03-26       Impact factor: 16.240

5.  Independent genome reduction and phylogenetic reclassification of the oceanic SAR11 clade.

Authors:  Johan Viklund; Thijs J G Ettema; Siv G E Andersson
Journal:  Mol Biol Evol       Date:  2011-09-07       Impact factor: 16.240

6.  Genome-scale phylogeny and the detection of systematic biases.

Authors:  Matthew J Phillips; Frédéric Delsuc; David Penny
Journal:  Mol Biol Evol       Date:  2004-04-14       Impact factor: 16.240

7.  Inferring the ancient history of the translation machinery and genetic code via recapitulation of ribosomal subunit assembly orders.

Authors:  Gregory P Fournier; Justin E Neumann; J Peter Gogarten
Journal:  PLoS One       Date:  2010-03-01       Impact factor: 3.240

Review 8.  The archaeal legacy of eukaryotes: a phylogenomic perspective.

Authors:  Lionel Guy; Jimmy H Saw; Thijs J G Ettema
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-07-03       Impact factor: 10.005

Review 9.  An archaeal origin of eukaryotes supports only two primary domains of life.

Authors:  Tom A Williams; Peter G Foster; Cymon J Cox; T Martin Embley
Journal:  Nature       Date:  2013-12-12       Impact factor: 49.962

10.  Heterotachy and long-branch attraction in phylogenetics.

Authors:  Hervé Philippe; Yan Zhou; Henner Brinkmann; Nicolas Rodrigue; Frédéric Delsuc
Journal:  BMC Evol Biol       Date:  2005-10-06       Impact factor: 3.260
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  12 in total

1.  Detection and analysis of elusive members of a novel and diverse archaeal community within a thermal spring streamer consortium.

Authors:  Daniel R Colman; Raquela Thomas; Kendra R Maas; Cristina D Takacs-Vesbach
Journal:  Extremophiles       Date:  2014-12-05       Impact factor: 2.395

2.  Evolutionary origin of a streamlined marine bacterioplankton lineage.

Authors:  Haiwei Luo
Journal:  ISME J       Date:  2014-11-28       Impact factor: 10.302

Review 3.  Perspectives on Cultivation Strategies of Archaea.

Authors:  Yihua Sun; Yang Liu; Jie Pan; Fengping Wang; Meng Li
Journal:  Microb Ecol       Date:  2019-08-20       Impact factor: 4.552

Review 4.  The growing tree of Archaea: new perspectives on their diversity, evolution and ecology.

Authors:  Panagiotis S Adam; Guillaume Borrel; Céline Brochier-Armanet; Simonetta Gribaldo
Journal:  ISME J       Date:  2017-08-04       Impact factor: 10.302

Review 5.  Archaea and the origin of eukaryotes.

Authors:  Laura Eme; Anja Spang; Jonathan Lombard; Courtney W Stairs; Thijs J G Ettema
Journal:  Nat Rev Microbiol       Date:  2017-11-10       Impact factor: 60.633

6.  Single-Cell-Genomics-Facilitated Read Binning of Candidate Phylum EM19 Genomes from Geothermal Spring Metagenomes.

Authors:  Eric D Becraft; Jeremy A Dodsworth; Senthil K Murugapiran; J Ingemar Ohlsson; Brandon R Briggs; Jad Kanbar; Iwijn De Vlaminck; Stephen R Quake; Hailiang Dong; Brian P Hedlund; Wesley D Swingley
Journal:  Appl Environ Microbiol       Date:  2015-12-04       Impact factor: 4.792

Review 7.  Diversity, ecology and evolution of Archaea.

Authors:  Brett J Baker; Valerie De Anda; Kiley W Seitz; Nina Dombrowski; Alyson E Santoro; Karen G Lloyd
Journal:  Nat Microbiol       Date:  2020-05-04       Impact factor: 17.745

8.  A standardized archaeal taxonomy for the Genome Taxonomy Database.

Authors:  Christian Rinke; Maria Chuvochina; Aaron J Mussig; Pierre-Alain Chaumeil; Adrián A Davín; David W Waite; William B Whitman; Donovan H Parks; Philip Hugenholtz
Journal:  Nat Microbiol       Date:  2021-06-21       Impact factor: 17.745

9.  Archaeal ancestors of eukaryotes: not so elusive any more.

Authors:  Eugene V Koonin
Journal:  BMC Biol       Date:  2015-10-05       Impact factor: 7.431

Review 10.  The universal tree of life: an update.

Authors:  Patrick Forterre
Journal:  Front Microbiol       Date:  2015-07-21       Impact factor: 5.640
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