Literature DB >> 24513115

Stimulators of translation identified during a small molecule screening campaign.

Unkyung Shin, David E Williams, Dima Kozakov, David R Hall, Dmitri Beglov, Sandor Vajda, Raymond J Andersen, Jerry Pelletier.   

Abstract

In screening a library of natural and synthetic products for eukaryotic translation modulators, we identified two natural products, isohymenialdisine and hymenialdisine, that exhibit stimulatory effects on translation. The characterization of these compounds led to the insight that mRNA used to program the translation extracts during high-throughput assay setup was leading to phosphorylation of eIF2α, a potent negative regulatory event that is mediated by one of four kinases. We identified double-stranded RNA-dependent protein kinase (PKR) as the eIF2α kinase that was being activated by exogenously added mRNA template. Characterization of the mode of action of isohymenialdisine revealed that it directly acts on PKR by inhibiting autophosphorylation, perturbs the PKR-eIF2α phosphorylation axis, and can be modeled into the PKR ATP binding site. Our results identify a source of "false positives" for high-throughput screen campaigns using translation extracts, raising a cautionary note for this type of screen.

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Year:  2014        PMID: 24513115      PMCID: PMC3943918          DOI: 10.1016/j.ab.2013.10.026

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  57 in total

1.  Heterologous dimerization domains functionally substitute for the double-stranded RNA binding domains of the kinase PKR.

Authors:  T L Ung; C Cao; J Lu; K Ozato; T E Dever
Journal:  EMBO J       Date:  2001-07-16       Impact factor: 11.598

Review 2.  A mechanistic overview of translation initiation in eukaryotes.

Authors:  Colin Echeverría Aitken; Jon R Lorsch
Journal:  Nat Struct Mol Biol       Date:  2012-06-05       Impact factor: 15.369

3.  Rapid computational identification of the targets of protein kinase inhibitors.

Authors:  William M Rockey; Adrian H Elcock
Journal:  J Med Chem       Date:  2005-06-16       Impact factor: 7.446

4.  A hybridoma-based in vitro translation system that efficiently synthesizes glycoproteins.

Authors:  Satoshi Mikami; Tominari Kobayashi; Shigeyuki Yokoyama; Hiroaki Imataka
Journal:  J Biotechnol       Date:  2006-06-30       Impact factor: 3.307

5.  Structural conservation of druggable hot spots in protein-protein interfaces.

Authors:  Dima Kozakov; David R Hall; Gwo-Yu Chuang; Regina Cencic; Ryan Brenke; Laurie E Grove; Dmitri Beglov; Jerry Pelletier; Adrian Whitty; Sandor Vajda
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-01       Impact factor: 11.205

Review 6.  Regulation of protein synthesis by heme-regulated eIF-2 alpha kinase.

Authors:  J J Chen; I M London
Journal:  Trends Biochem Sci       Date:  1995-03       Impact factor: 13.807

7.  Aldisine alkaloids from the Philippine sponge Stylissa massa are potent inhibitors of mitogen-activated protein kinase kinase-1 (MEK-1).

Authors:  Deniz Tasdemir; Robert Mallon; Michael Greenstein; Larry R Feldberg; Steven C Kim; Karen Collins; Donald Wojciechowicz; Gina C Mangalindan; Gisela P Concepción; Mary Kay Harper; Chris M Ireland
Journal:  J Med Chem       Date:  2002-01-17       Impact factor: 7.446

8.  Synthesis and target identification of hymenialdisine analogs.

Authors:  Yongqin Wan; Wooyoung Hur; Charles Y Cho; Yi Liu; Francisco J Adrian; Olivier Lozach; Stéphane Bach; Thomas Mayer; Doriano Fabbro; Laurent Meijer; Nathanael S Gray
Journal:  Chem Biol       Date:  2004-02

9.  Phosphorylation of eukaryotic elongation factor 2 (eEF2) by cyclin A-cyclin-dependent kinase 2 regulates its inhibition by eEF2 kinase.

Authors:  Asli A Hizli; Yong Chi; Jherek Swanger; John H Carter; Yi Liao; Markus Welcker; Alexey G Ryazanov; Bruce E Clurman
Journal:  Mol Cell Biol       Date:  2012-11-26       Impact factor: 4.272

10.  Nonaminoglycoside compounds induce readthrough of nonsense mutations.

Authors:  Liutao Du; Robert Damoiseaux; Shareef Nahas; Kun Gao; Hailiang Hu; Julianne M Pollard; Jimena Goldstine; Michael E Jung; Susanne M Henning; Carmen Bertoni; Richard A Gatti
Journal:  J Exp Med       Date:  2009-09-21       Impact factor: 14.307

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  1 in total

Review 1.  Marine Natural Products from New Caledonia--A Review.

Authors:  Sofia-Eléna Motuhi; Mohamed Mehiri; Claude Elisabeth Payri; Stéphane La Barre; Stéphane Bach
Journal:  Mar Drugs       Date:  2016-03-16       Impact factor: 5.118

  1 in total

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