Literature DB >> 24510704

Improvement of a gene targeting system for genetic manipulation in Penicillium digitatum.

Qian Xu1, Cong-yi Zhu, Ming-shang Wang, Xue-peng Sun, Hong-ye Li.   

Abstract

Penicillium digitatum is the most important pathogen of postharvest citrus. Gene targeting can be done in P. digitatum using homologous recombination via Agrobacterium tumefaciens mediated transformation (ATMT), but the frequencies are often very low. In the present study, we replaced the Ku80 homolog (a gene of the non-homologous end-joining (NHEJ) pathway) with the hygromycin resistance cassette (hph) by ATMT. No significant change in vegetative growth, conidiation, or pathogenicity was observed in Ku80-deficient strain (ΔPdKu80) of P. digitatum. However, using ΔPdKu80 as a targeting strain, the gene-targeting frequencies for both genes PdbrlA and PdmpkA were significantly increased. These results suggest that Ku80 plays an important role in homologous integration and the created ΔPdKu80 strain would be a good candidate for rapid gene function analysis in P. digitatum.

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Year:  2014        PMID: 24510704      PMCID: PMC3924387          DOI: 10.1631/jzus.B1300213

Source DB:  PubMed          Journal:  J Zhejiang Univ Sci B        ISSN: 1673-1581            Impact factor:   3.066


  27 in total

Review 1.  Partners and pathwaysrepairing a double-strand break.

Authors:  J E Haber
Journal:  Trends Genet       Date:  2000-06       Impact factor: 11.639

Review 2.  A Ku bridge over broken DNA.

Authors:  J M Jones; M Gellert; W Yang
Journal:  Structure       Date:  2001-10       Impact factor: 5.006

3.  Nonhomologous chromosomal integration of foreign DNA is completely dependent on MUS-53 (human Lig4 homolog) in Neurospora.

Authors:  Kazuma Ishibashi; Keiichiro Suzuki; Yoshinori Ando; Chihiro Takakura; Hirokazu Inoue
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-26       Impact factor: 11.205

4.  The calcineurin-responsive transcription factor Crz1 is required for conidation, full virulence and DMI resistance in Penicillium digitatum.

Authors:  Tianyuan Zhang; Qian Xu; Xuepeng Sun; Hongye Li
Journal:  Microbiol Res       Date:  2012-12-11       Impact factor: 5.415

5.  Genomewide investigation into DNA elements and ABC transporters involved in imazalil resistance in Penicillium digitatum.

Authors:  Xuepeng Sun; Ruoxin Ruan; Lingyun Lin; Congyi Zhu; Tianyuan Zhang; Mingshuang Wang; Hongye Li; Dongliang Yu
Journal:  FEMS Microbiol Lett       Date:  2013-09-02       Impact factor: 2.742

6.  A versatile and efficient gene-targeting system for Aspergillus nidulans.

Authors:  Tania Nayak; Edyta Szewczyk; C Elizabeth Oakley; Aysha Osmani; Leena Ukil; Sandra L Murray; Michael J Hynes; Stephen A Osmani; Berl R Oakley
Journal:  Genetics       Date:  2005-12-30       Impact factor: 4.562

7.  A novel ABC transporter gene, PMR5, is involved in multidrug resistance in the phytopathogenic fungus Penicillium digitatum.

Authors:  R Nakaune; H Hamamoto; J Imada; K Akutsu; T Hibi
Journal:  Mol Genet Genomics       Date:  2002-02-22       Impact factor: 3.291

8.  Ku70 or Ku80 deficiencies in the fungus Botrytis cinerea facilitate targeting of genes that are hard to knock out in a wild-type context.

Authors:  Mathias Choquer; Guillaume Robin; Pascal Le Pêcheur; Corinne Giraud; Caroline Levis; Muriel Viaud
Journal:  FEMS Microbiol Lett       Date:  2008-12       Impact factor: 2.742

9.  Agrobacterium tumefaciens-mediated genetic transformation of the phytopathogenic fungus Penicillium digitatum.

Authors:  Ji-Ye Wang; Hong-Ye Li
Journal:  J Zhejiang Univ Sci B       Date:  2008-10       Impact factor: 3.066

10.  Genome sequence of the necrotrophic fungus Penicillium digitatum, the main postharvest pathogen of citrus.

Authors:  Marina Marcet-Houben; Ana-Rosa Ballester; Beatriz de la Fuente; Eleonora Harries; Jose F Marcos; Luis González-Candelas; Toni Gabaldón
Journal:  BMC Genomics       Date:  2012-11-21       Impact factor: 3.969

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  2 in total

1.  Deletion of TpKu70 facilitates gene targeting in Talaromyces pinophilus and identification of TpAmyR involvement in amylase production.

Authors:  Ting Zhang; Shuai Zhao; Lu-Sheng Liao; Cheng-Xi Li; Gui-Yan Liao; Jia-Xun Feng
Journal:  World J Microbiol Biotechnol       Date:  2017-08-28       Impact factor: 3.312

2.  Application of recyclable CRISPR/Cas9 tools for targeted genome editing in the postharvest pathogenic fungi Penicillium digitatum and Penicillium expansum.

Authors:  Sandra Garrigues; Paloma Manzanares; Jose F Marcos
Journal:  Curr Genet       Date:  2022-03-17       Impact factor: 2.695

  2 in total

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