Literature DB >> 24508958

1,3,5-Tris(4-bromophenyl)benzene prenucleation clusters from metadynamics.

Matteo Salvalaglio1, Federico Giberti2, Michele Parrinello2.   

Abstract

Recent experimental evidence has shown that the nucleation of 1,3,5-tris(4-bromophenyl)benzene (3BrY) follows a two-step mechanism. In this work, the formation of clusters of 3BrY from homogeneous water and methanol solutions is simulated using metadynamics. The local structure of 3BrY molecules in the clusters is then compared with the low-temperature crystal structure of 3BrY, as well as with an alternative 3BrY high-pressure crystal packing obtained through Parrinello-Rahaman molecular dynamics simulations. It is found that the interactions between the aromatic cores of 3BrY represent the main supramolecular motif observed in both the local structure of the prenucleation clusters and in the crystalline state. Within the clusters, these interactions lead to the presence of dimers and trimers locally arranged in crystal-like configurations.

Entities:  

Keywords:  1,3,5-tris(4-bromophenyl)benzene; 3BrY; clusters; computational materials discovery; metadynamics; nucleation; thermal expansion coefficient

Year:  2014        PMID: 24508958     DOI: 10.1107/S2053229613026946

Source DB:  PubMed          Journal:  Acta Crystallogr C Struct Chem        ISSN: 2053-2296            Impact factor:   1.172


  5 in total

1.  Molecular-dynamics simulations of urea nucleation from aqueous solution.

Authors:  Matteo Salvalaglio; Claudio Perego; Federico Giberti; Marco Mazzotti; Michele Parrinello
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-09       Impact factor: 11.205

Review 2.  Metadynamics studies of crystal nucleation.

Authors:  Federico Giberti; Matteo Salvalaglio; Michele Parrinello
Journal:  IUCrJ       Date:  2015-02-10       Impact factor: 4.769

3.  Solvation and Aggregation of Meta-Aminobenzoic Acid in Water: Density Functional Theory and Molecular Dynamics Study.

Authors:  Etienne Gaines; Devis Di Tommaso
Journal:  Pharmaceutics       Date:  2018-01-23       Impact factor: 6.321

4.  A general strategy for colloidal stable ultrasmall amorphous mineral clusters in organic solvents.

Authors:  Shengtong Sun; Denis Gebauer; Helmut Cölfen
Journal:  Chem Sci       Date:  2016-10-13       Impact factor: 9.825

Review 5.  Molecular simulations of self-assembling bio-inspired supramolecular systems and their connection to experiments.

Authors:  Pim W J M Frederix; Ilias Patmanidis; Siewert J Marrink
Journal:  Chem Soc Rev       Date:  2018-05-21       Impact factor: 54.564

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.