Literature DB >> 24508018

Dynamics of +1 ribosomal frameshifting.

Ping Xie1.   

Abstract

It has been well characterized that the amino acid starvation can induce +1 frameshifting. However, how the +1 frameshifting occurs has not been fully understood. Here, taking Escherichia coli RF2 programmed frameshifting as an example we present systematical analysis of the +1 frameshifting that could occur during every state-transition step in elongation phase of protein synthesis, showing that the +1 frameshifting can occur only during the period after deacylated tRNA dissociation from the posttranslocation state and before the recognition of the next "hungry" codon. The +1 frameshifting efficiency is theoretically studied, with the simple analytical solutions showing that the high efficiency is almost solely due to the occurrence of ribosome pausing which in turn results from the insufficient RF2. The analytical solutions also provide a consistent explanation of a lot of independent experimental data.
Copyright © 2014 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Ribosome; Ribosome pausing; Translation elongation; Translational regulation; Virus

Mesh:

Substances:

Year:  2014        PMID: 24508018     DOI: 10.1016/j.mbs.2014.01.008

Source DB:  PubMed          Journal:  Math Biosci        ISSN: 0025-5564            Impact factor:   2.144


  3 in total

1.  Ribosomal frameshifting and dual-target antiactivation restrict quorum-sensing-activated transfer of a mobile genetic element.

Authors:  Joshua P Ramsay; Laura G L Tester; Anthony S Major; John T Sullivan; Christina D Edgar; Torsten Kleffmann; Jackson R Patterson-House; Drew A Hall; Warren P Tate; Michael F Hynes; Clive W Ronson
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-18       Impact factor: 11.205

Review 2.  To Know How a Gene Works, We Need to Redefine It First but then, More Importantly, to Let the Cell Itself Decide How to Transcribe and Process Its RNAs.

Authors:  Yuping Jia; Lichan Chen; Yukui Ma; Jian Zhang; Ningzhi Xu; Dezhong Joshua Liao
Journal:  Int J Biol Sci       Date:  2015-11-19       Impact factor: 6.580

3.  Model of the pathway of -1 frameshifting: Long pausing.

Authors:  Ping Xie
Journal:  Biochem Biophys Rep       Date:  2016-01-29
  3 in total

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