Literature DB >> 24505733

Multiple sclerosis lesion segmentation using dictionary learning and sparse coding.

Nick Weiss1, Daniel Rueckert2, Anil Rao2.   

Abstract

The segmentation of lesions in the brain during the development of Multiple Sclerosis is part of the diagnostic assessment for this disease and gives information on its current severity. This laborious process is still carried out in a manual or semiautomatic fashion by clinicians because published automatic approaches have not been universal enough to be widely employed in clinical practice. Thus Multiple Sclerosis lesion segmentation remains an open problem. In this paper we present a new unsupervised approach addressing this problem with dictionary learning and sparse coding methods. We show its general applicability to the problem of lesion segmentation by evaluating our approach on synthetic and clinical image data and comparing it to state-of-the-art methods. Furthermore the potential of using dictionary learning and sparse coding for such segmentation tasks is investigated and various possibilities for further experiments are discussed.

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Mesh:

Year:  2013        PMID: 24505733     DOI: 10.1007/978-3-642-40811-3_92

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  11 in total

1.  A toolbox for multiple sclerosis lesion segmentation.

Authors:  Eloy Roura; Arnau Oliver; Mariano Cabezas; Sergi Valverde; Deborah Pareto; Joan C Vilanova; Lluís Ramió-Torrentà; Àlex Rovira; Xavier Lladó
Journal:  Neuroradiology       Date:  2015-07-31       Impact factor: 2.804

2.  Longitudinal multiple sclerosis lesion segmentation: Resource and challenge.

Authors:  Aaron Carass; Snehashis Roy; Amod Jog; Jennifer L Cuzzocreo; Elizabeth Magrath; Adrian Gherman; Julia Button; James Nguyen; Ferran Prados; Carole H Sudre; Manuel Jorge Cardoso; Niamh Cawley; Olga Ciccarelli; Claudia A M Wheeler-Kingshott; Sébastien Ourselin; Laurence Catanese; Hrishikesh Deshpande; Pierre Maurel; Olivier Commowick; Christian Barillot; Xavier Tomas-Fernandez; Simon K Warfield; Suthirth Vaidya; Abhijith Chunduru; Ramanathan Muthuganapathy; Ganapathy Krishnamurthi; Andrew Jesson; Tal Arbel; Oskar Maier; Heinz Handels; Leonardo O Iheme; Devrim Unay; Saurabh Jain; Diana M Sima; Dirk Smeets; Mohsen Ghafoorian; Bram Platel; Ariel Birenbaum; Hayit Greenspan; Pierre-Louis Bazin; Peter A Calabresi; Ciprian M Crainiceanu; Lotta M Ellingsen; Daniel S Reich; Jerry L Prince; Dzung L Pham
Journal:  Neuroimage       Date:  2017-01-11       Impact factor: 6.556

3.  Anomaly detection in fundus images by self-adaptive decomposition via local and color based sparse coding.

Authors:  Yuchen Du; Lisheng Wang; Benzhi Chen; Chengyang An; Hao Liu; Ying Fan; Xiuying Wang; Xun Xu
Journal:  Biomed Opt Express       Date:  2022-07-21       Impact factor: 3.562

4.  Longitudinal Patch-Based Segmentation of Multiple Sclerosis White Matter Lesions.

Authors:  Snehashis Roy; Aaron Carass; Jerry L Prince; Dzung L Pham
Journal:  Mach Learn Med Imaging       Date:  2015-10-02

5.  Subject-Specific Sparse Dictionary Learning for Atlas-Based Brain MRI Segmentation.

Authors:  Snehashis Roy; Qing He; Elizabeth Sweeney; Aaron Carass; Daniel S Reich; Jerry L Prince; Dzung L Pham
Journal:  IEEE J Biomed Health Inform       Date:  2015-09       Impact factor: 5.772

6.  Rotation-invariant multi-contrast non-local means for MS lesion segmentation.

Authors:  Nicolas Guizard; Pierrick Coupé; Vladimir S Fonov; Jose V Manjón; Douglas L Arnold; D Louis Collins
Journal:  Neuroimage Clin       Date:  2015-05-13       Impact factor: 4.881

7.  Patch-Based Segmentation with Spatial Consistency: Application to MS Lesions in Brain MRI.

Authors:  Roey Mechrez; Jacob Goldberger; Hayit Greenspan
Journal:  Int J Biomed Imaging       Date:  2016-01-24

Review 8.  Deep Learning for Brain MRI Segmentation: State of the Art and Future Directions.

Authors:  Zeynettin Akkus; Alfiia Galimzianova; Assaf Hoogi; Daniel L Rubin; Bradley J Erickson
Journal:  J Digit Imaging       Date:  2017-08       Impact factor: 4.056

9.  White matter hyperintensity and stroke lesion segmentation and differentiation using convolutional neural networks.

Authors:  R Guerrero; C Qin; O Oktay; C Bowles; L Chen; R Joules; R Wolz; M C Valdés-Hernández; D A Dickie; J Wardlaw; D Rueckert
Journal:  Neuroimage Clin       Date:  2017-12-20       Impact factor: 4.881

10.  Radius-optimized efficient template matching for lesion detection from brain images.

Authors:  Subhranil Koley; Pranab K Dutta; Iman Aganj
Journal:  Sci Rep       Date:  2021-06-02       Impact factor: 4.379

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