Literature DB >> 24505726

Tensor metrics and charged containers for 3D Q-space sample distribution.

Hans Knutsson1, Carl-Fredrik Westin2.   

Abstract

This paper extends Jones' popular electrostatic repulsion based algorithm for distribution of single-shell Q-space samples in two fundamental ways. The first alleviates the single-shell requirement enabling full Q-space sampling. Such an extension is not immediately obvious since it requires distributing samples evenly in 3 dimensions. The extension is as elegant as it is simple: Add a container volume of the desired shape having a constant charge density and a total charge equal to the negative of the sum of the moving point charges. Results for spherical and cubic charge containers are given. The second extension concerns the way distances between sample point are measured. The Q-space samples represent orientation, rather than direction and it would seem appropriate to use a metric that reflects this fact, e.g. a tensor metric. To this end we present a means to employ a generalized metric in the optimization. Minimizing the energy will result in a 3-dimensional distribution of point charges that is uniform in the terms of the specified metric. The radically different distributions generated using different metrics pinpoints a fundamental question: Is there an inherent optimal metric for Q-space sampling? Our work provides a versatile tool to explore the role of different metrics and we believe it will be an important contribution to further the continuing debate and research on the matter.

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Year:  2013        PMID: 24505726      PMCID: PMC4039085          DOI: 10.1007/978-3-642-40811-3_85

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  7 in total

1.  Non-invasive assessment of axonal fiber connectivity in the human brain via diffusion tensor MRI.

Authors:  D K Jones; A Simmons; S C Williams; M A Horsfield
Journal:  Magn Reson Med       Date:  1999-07       Impact factor: 4.668

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Journal:  Med Image Comput Comput Assist Interv       Date:  2011

3.  An efficient interlaced multi-shell sampling scheme for reconstruction of diffusion propagators.

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4.  New modeling and experimental framework to characterize hindered and restricted water diffusion in brain white matter.

Authors:  Yaniv Assaf; Raisa Z Freidlin; Gustavo K Rohde; Peter J Basser
Journal:  Magn Reson Med       Date:  2004-11       Impact factor: 4.668

5.  Hybrid diffusion imaging.

Authors:  Yu-Chien Wu; Andrew L Alexander
Journal:  Neuroimage       Date:  2007-03-24       Impact factor: 6.556

6.  A general framework for experiment design in diffusion MRI and its application in measuring direct tissue-microstructure features.

Authors:  Daniel C Alexander
Journal:  Magn Reson Med       Date:  2008-08       Impact factor: 4.668

7.  Parametric representation of multiple white matter fascicles from cube and sphere diffusion MRI.

Authors:  Benoit Scherrer; Simon K Warfield
Journal:  PLoS One       Date:  2012-11-26       Impact factor: 3.240

  7 in total
  4 in total

1.  From expected propagator distribution to optimal q-space sample metric.

Authors:  Hans Knutsson; Carl-Fredrik Westin
Journal:  Med Image Comput Comput Assist Interv       Date:  2014

2.  Versatile, robust, and efficient tractography with constrained higher-order tensor fODFs.

Authors:  Michael Ankele; Lek-Heng Lim; Samuel Groeschel; Thomas Schultz
Journal:  Int J Comput Assist Radiol Surg       Date:  2017-04-29       Impact factor: 2.924

3.  The link between diffusion MRI and tumor heterogeneity: Mapping cell eccentricity and density by diffusional variance decomposition (DIVIDE).

Authors:  Filip Szczepankiewicz; Danielle van Westen; Elisabet Englund; Carl-Fredrik Westin; Freddy Ståhlberg; Jimmy Lätt; Pia C Sundgren; Markus Nilsson
Journal:  Neuroimage       Date:  2016-07-20       Impact factor: 6.556

4.  Constrained optimization of gradient waveforms for generalized diffusion encoding.

Authors:  Jens Sjölund; Filip Szczepankiewicz; Markus Nilsson; Daniel Topgaard; Carl-Fredrik Westin; Hans Knutsson
Journal:  J Magn Reson       Date:  2015-10-31       Impact factor: 2.229

  4 in total

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