Literature DB >> 24505724

Auto-calibrating spherical deconvolution based on ODF sparsity.

Thomas Schultz1, Samuel Groeschel2.   

Abstract

Spherical deconvolution models the diffusion MRI signal as the convolution of a fiber orientation density function (fODF) with a single fiber response. We propose a novel calibration procedure that automatically determines this fiber response. This has three advantages: First, the user no longer needs to provide an estimate of the response. Second, we estimate a per-voxel fiber response, which is more adequate for the analysis of patient data with focal white matter degeneration. Third, parameters of the estimated response reflect diffusion properties of the white matter tissue, and can be used for quantitative analysis. Our method works by finding a tradeoff between a low fitting error and a sparse fODF. Results on simulated data demonstrate that auto-calibration successfully avoids erroneous fODF peaks that can occur with standard deconvolution, and that it resolves fiber crossings with better angular resolution than FORECAST, an alternative method. Parameter maps and tractography results corroborate applicability to clinical data.

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Mesh:

Year:  2013        PMID: 24505724     DOI: 10.1007/978-3-642-40811-3_83

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  8 in total

1.  Versatile, robust, and efficient tractography with constrained higher-order tensor fODFs.

Authors:  Michael Ankele; Lek-Heng Lim; Samuel Groeschel; Thomas Schultz
Journal:  Int J Comput Assist Radiol Surg       Date:  2017-04-29       Impact factor: 2.924

2.  Convexity-constrained and nonnegativity-constrained spherical factorization in diffusion-weighted imaging.

Authors:  Daan Christiaens; Stefan Sunaert; Paul Suetens; Frederik Maes
Journal:  Neuroimage       Date:  2016-10-27       Impact factor: 6.556

3.  Toward tract-specific fractional anisotropy (TSFA) at crossing-fiber regions with clinical diffusion MRI.

Authors:  Virendra Mishra; Xiaohu Guo; Mauricio R Delgado; Hao Huang
Journal:  Magn Reson Med       Date:  2014-12-01       Impact factor: 4.668

4.  Rotationally-invariant mapping of scalar and orientational metrics of neuronal microstructure with diffusion MRI.

Authors:  Dmitry S Novikov; Jelle Veraart; Ileana O Jelescu; Els Fieremans
Journal:  Neuroimage       Date:  2018-03-12       Impact factor: 6.556

5.  Characterizing brain tissue by assessment of the distribution of anisotropic microstructural environments in diffusion-compartment imaging (DIAMOND).

Authors:  Benoit Scherrer; Armin Schwartzman; Maxime Taquet; Mustafa Sahin; Sanjay P Prabhu; Simon K Warfield
Journal:  Magn Reson Med       Date:  2015-09-12       Impact factor: 4.668

6.  Improving Fiber Alignment in HARDI by Combining Contextual PDE Flow with Constrained Spherical Deconvolution.

Authors:  J M Portegies; R H J Fick; G R Sanguinetti; S P L Meesters; G Girard; R Duits
Journal:  PLoS One       Date:  2015-10-14       Impact factor: 3.240

Review 7.  Modelling white matter with spherical deconvolution: How and why?

Authors:  Flavio Dell'Acqua; J-Donald Tournier
Journal:  NMR Biomed       Date:  2018-08-16       Impact factor: 4.044

8.  The effect of gradient nonlinearities on fiber orientation estimates from spherical deconvolution of diffusion magnetic resonance imaging data.

Authors:  Fenghua Guo; Alberto de Luca; Greg Parker; Derek K Jones; Max A Viergever; Alexander Leemans; Chantal M W Tax
Journal:  Hum Brain Mapp       Date:  2020-10-09       Impact factor: 5.399

  8 in total

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