| Literature DB >> 24498130 |
Angela J Rogers1, Michael McGeachie2, Rebecca M Baron3, Lee Gazourian3, Jeffrey A Haspel3, Kiichi Nakahira4, Laura E Fredenburgh3, Gary M Hunninghake3, Benjamin A Raby5, Michael A Matthay6, Ronny M Otero7, Vance G Fowler8, Emanuel P Rivers7, Christopher W Woods8, Stephen Kingsmore9, Ray J Langley10, Augustine M K Choi4.
Abstract
OBJECTIVE: To identify metabolomic biomarkers predictive of Intensive Care Unit (ICU) mortality in adults. RATIONALE: Comprehensive metabolomic profiling of plasma at ICU admission to identify biomarkers associated with mortality has recently become feasible.Entities:
Mesh:
Substances:
Year: 2014 PMID: 24498130 PMCID: PMC3907548 DOI: 10.1371/journal.pone.0087538
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Baseline Characteristics.
| RoCI (N = 90 | CAPSOD (N = 149) | Roci vs CAPSOD | ||||||
| Live (N = 60) | Die (N = 30) | Pval | Live (N = 115) | Die (N = 34) | Pval | Pval | ||
| Age | 53 (14) | 58 (15) | 0.15 | 58 (17) | 69 (16) | 0.002 | 0.009 | |
| Apache Score | 23 (9) | 30 (11) | 0.00 | 15 (7) | 23 (8) | 8.90E–06 | 1.92E-11 | |
| MDRD_GFR | 67 (60) | 59 (43) | 0.60 | 62 (57) | 51 (40) | 0.356 | 0.364 | |
| Days Blood Draw | 2.2 (1) | 2.1 (1) | 0.42 | 0 (0) | 0 (0) | N/A | 1.03E-49 | |
| Male gender | 28 (47%) | 11 (37%) | 0.50 | 53 (46%) | 15 (44%) | 1.000 | 0.789 | |
| Malignancy | 15 (25%) | 20 (67%) | 0.00 | 10 (9%) | 9 (26%) | 0.015 | 5.25E-06 | |
| White Race | 42 (70%) | 28 (93%) | 0.01 | 35 (30%) | 7 (21%) | 0.288 | 5.35E-14 | |
| Chronic Kidney Disease | 10 (17%) | 9 (30%) | 0.17 | 26 (23%) | 9 (26%) | 0.731 | 0.844 | |
| Immunosuppressive Meds | 14 (23%) | 16 (53%) | 0.01 | 6 (5%) | 2 (6%) | 1.000 | 2.04E-08 | |
| Diabetes | 18 (30%) | 3 (10%) | 0.04 | 38 (33%) | 13 (38%) | 0.681 | 0.082 | |
Shown are mean (SD) or N (%). P values are based on Wilcoxson or Fisher’s exact test as appropriate.
Top 20 replicated metabolites, logistic regression.
| Metabolite | Class | RoCI β | Roci P value | CAPSOD β | CAPSODP value |
| 1-arachidonoyl-GPE (20:4) | Lipid | −1.51 | 0.0001 | −0.41 | 0.0142 |
| 3-(4-hydroxyphenyl) lactate (HPLA) | Amino acid | 1.09 | 0.0003 | 0.86 | 1.3E−05 |
| 5taurochenodeoxycholate | Lipid | 0.59 | 0.0007 | 0.22 | 0.0028 |
| taurocholate | Lipid | 0.48 | 0.0015 | 0.21 | 0.0077 |
| gamma-glutamylphenylalanine | Peptide | 1.59 | 0.0017 | 0.61 | 0.0272 |
| glycochenodeoxycholate | Lipid | 0.58 | 0.0020 | 0.19 | 0.0114 |
| 1-arachidonoyl-GPC (20:4) | Lipid | −0.56 | 0.0032 | −0.30 | 0.0016 |
| glycocholate | Lipid | 0.53 | 0.0036 | 0.18 | 0.0259 |
| Hydroxyisovaleroyl-carnitine (C5) | Amino acid | 0.79 | 0.0041 | 0.40 | 0.0317 |
| hexanoylcarnitine (C6) | Lipid | 1.15 | 0.0053 | 0.97 | 6.6E−05 |
| lactate | Carbohydrate | 1.11 | 0.0071 | 0.69 | 0.0084 |
| alpha-hydroxyisovalerate | Amino acid | 0.72 | 0.0071 | 0.58 | 3.8E−04 |
| 1-methylimidazoleacetate | Amino acid | 0.63 | 0.0082 | 0.38 | 0.0104 |
| isobutyrylcarnitine (C4) | Amino acid | 0.71 | 0.0095 | 0.34 | 0.034 |
| beta-hydroxyisovalerate | Amino acid | 0.83 | 0.0134 | 0.37 | 0.0364 |
| kynurenate | Amino acid | 0.46 | 0.0137 | 0.37 | 0.0494 |
| 2-methylbutyroylcarnitine (C5) | Amino acid | 0.75 | 0.0142 | 0.59 | 0.0024 |
| 1-linoleoyl-GPC (18:2) | Lipid | −0.42 | 0.0155 | −0.30 | 0.0162 |
| propionylcarnitine (C3) | Lipid | 0.90 | 0.0156 | 0.62 | 0.0013 |
| cortisol | Lipid | 0.62 | 0.0175 | 0.56 | 0.0118 |
β and p values shown are for results for association with 28-day mortality, using logistic regression, after adjustment for age, gender, race, malignancy status, and GFR. CAPSOD p values are 1-sided, only metabolites with consistent direction were considered replication. Metabolite levels were log2 transformed for analysis. Data for all 31 replicated metabolites are shown in Supplemental .
Figure 1Levels of 1-arachidonoylglycero-phosphoethanolamine and sucrose are associated with 28-day mortality in both RoCI and CAPSOD cohorts.
Log2-normalized level of 1-arachidonoylGPE(20:4), the most significantly associated metabolite in the RoCI cohort, is higher among ICU survivors in both the RoCI (light) and CAPSOD (dark) cohorts (Figure 1A and 1B). 3-(4-hydroxyphenyl) lactate (HPLA) is lower among ICU survivors in both cohorts (Figure 1C and 1D). Boxplots depict median (line) and range (edges of boxplots). P values are based on Wilcoxon’s test and are 1-sided in CAPSOD.
Figure 2Relationship of 5 metabolites included in Bayesian Network to 28-day mortality.
This network maximizes the posterior likelihood of data over all networks predictive of mortality. This network achieves 91% AUC in RoCI and 74% AUC in CAPSOD. Directed edges indicate statistical dependence and do not represent causative links.