Literature DB >> 2449693

Diffusion models of ion-channel gating and the origin of power-law distributions from single-channel recording.

G L Millhauser1, E E Salpeter, R E Oswald.   

Abstract

The lifetimes of the unitary currents from ion channels, as revealed from single-channel recording, are traditionally thought to follow exponential or multiexponential distributions. The interpretation of these event-time distributions is that the gating process follows Markov kinetics among a small number of states. There is recent evidence, however, that certain systems exhibit distributions that follow power laws or functions related to power laws. Likewise, it has been suggested that data sets that appear to be multiexponential may be fit to simple power laws as well. In this paper we propose a different view of ion-channel-gating kinetics that is consistent with these recent experimental observations. We retain the Markovian nature of the kinetics, but, in contrast to the traditional models, we suggest that ion-channel proteins have a very large number of states all of similar energy. Gating, therefore, resembles a diffusion process. We show that our simplest one-dimensional model exhibits single-channel distributions that follow power laws of the form t-a, where 1/2 less than or equal to a less than or equal to 3/2. Exponents determined from recent experiments approximately fall within this range. We believe that this model is consistent with modern views of protein dynamics and, thus, may provide a key to the molecular details of the gating process.

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Year:  1988        PMID: 2449693      PMCID: PMC279800          DOI: 10.1073/pnas.85.5.1503

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  12 in total

1.  The shapes of random walks.

Authors:  J Rudnick; G Gaspari
Journal:  Science       Date:  1987-07-24       Impact factor: 47.728

2.  Fractal model of ion-channel kinetics.

Authors:  L S Liebovitch; J Fischbarg; J P Koniarek; I Todorova; M Wang
Journal:  Biochim Biophys Acta       Date:  1987-01-26

3.  Quantitative description of three modes of activity of fast chloride channels from rat skeletal muscle.

Authors:  A L Blatz; K L Magleby
Journal:  J Physiol       Date:  1986-09       Impact factor: 5.182

4.  Brief closures of gramicidin A channels in lipid bilayer membranes.

Authors:  A Ring
Journal:  Biochim Biophys Acta       Date:  1986-04-25

Review 5.  The study of conformational states of proteins by nuclear magnetic resonance.

Authors:  I D Campbell; C M Dobson; R J Williams
Journal:  Biochem J       Date:  1985-10-01       Impact factor: 3.857

6.  Multiple conformational states of proteins: a molecular dynamics analysis of myoglobin.

Authors:  R Elber; M Karplus
Journal:  Science       Date:  1987-01-16       Impact factor: 47.728

7.  Temperature-dependent X-ray diffraction as a probe of protein structural dynamics.

Authors:  H Frauenfelder; G A Petsko; D Tsernoglou
Journal:  Nature       Date:  1979-08-16       Impact factor: 49.962

8.  The occurrence of long openings in the purified cholinergic receptor channel increases with acetylcholine concentration.

Authors:  P Labarca; M S Montal; J M Lindstrom; M Montal
Journal:  J Neurosci       Date:  1985-12       Impact factor: 6.167

9.  Single acetylcholine-activated channels show burst-kinetics in presence of desensitizing concentrations of agonist.

Authors:  B Sakmann; J Patlak; E Neher
Journal:  Nature       Date:  1980-07-03       Impact factor: 49.962

10.  Kinetics of activation of acetylcholine receptors in a mouse muscle cell line under a range of acetylcholine concentrations.

Authors:  S Hestrin; J I Korenbrot; A V Maricq
Journal:  Biophys J       Date:  1987-03       Impact factor: 4.033

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  58 in total

1.  Slow recovery from inactivation regulates the availability of voltage-dependent Na(+) channels in hippocampal granule cells, hilar neurons and basket cells.

Authors:  R K Ellerkmann; V Riazanski; C E Elger; B W Urban; H Beck
Journal:  J Physiol       Date:  2001-04-15       Impact factor: 5.182

2.  Ion channel gating: a first-passage time analysis of the Kramers type.

Authors:  Igor Goychuk; Peter Hänggi
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-12       Impact factor: 11.205

Review 3.  Ligand-gated ion channel currents in a nonstationary lyotropic model.

Authors:  Leif Matsson; Virulh Sa-yakanit; Santipong Boribarn
Journal:  Neurochem Res       Date:  2003-02       Impact factor: 3.996

4.  Statistical properties predicted by the ball and chain model of channel inactivation.

Authors:  L S Liebovitch; L Y Selector; R P Kline
Journal:  Biophys J       Date:  1992-12       Impact factor: 4.033

5.  Voltage-dependent gating mechanism for single fast chloride channels from rat skeletal muscle.

Authors:  D S Weiss; K L Magleby
Journal:  J Physiol       Date:  1992       Impact factor: 5.182

6.  When translocation dynamics becomes anomalous.

Authors:  Ralf Metzler; Joseph Klafter
Journal:  Biophys J       Date:  2003-10       Impact factor: 4.033

7.  Steady-state kinetics of solitary batrachotoxin-treated sodium channels. Kinetics on a bounded continuum of polymer conformations.

Authors:  K A Rubinson
Journal:  Biophys J       Date:  1992-02       Impact factor: 4.033

8.  Gating of acetylcholine receptor channels: brownian motion across a broad transition state.

Authors:  Anthony Auerbach
Journal:  Proc Natl Acad Sci U S A       Date:  2005-01-21       Impact factor: 11.205

9.  Fractal stochastic modeling of spiking activity in suprachiasmatic nucleus neurons.

Authors:  Sung-Il Kim; Jaeseung Jeong; Yongho Kwak; Yang In Kim; Seung Hun Jung; Kyoung J Lee
Journal:  J Comput Neurosci       Date:  2005-08       Impact factor: 1.621

10.  Percolation model of ionic channel dynamics.

Authors:  W Doster; W Schirmacher; M Settles
Journal:  Biophys J       Date:  1990-03       Impact factor: 4.033

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