Literature DB >> 24491596

Genomic variability as a driver of plant-pathogen coevolution?

Talia L Karasov1, Matthew W Horton2, Joy Bergelson3.   

Abstract

Pathogens apply one of the strongest selective pressures in plant populations. Understanding plant-pathogen coevolution has therefore been a major research focus for at least sixty years [1]. Recent comparative genomic studies have revealed that the genes involved in plant defense and pathogen virulence are among the most polymorphic in the respective genomes. Which fraction of this diversity influences the host-pathogen interaction? Do coevolutionary dynamics maintain variation? Here we review recent literature on the evolutionary and molecular processes that shape this variation, focusing primarily on gene-for-gene interactions. In summarizing theoretical and empirical studies of the processes that shape this variation in natural plant and pathogen populations, we find a disconnect between the complexity of ecological interactions involving hosts and their myriad microbes, and the models that describe them.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 24491596      PMCID: PMC4696489          DOI: 10.1016/j.pbi.2013.12.003

Source DB:  PubMed          Journal:  Curr Opin Plant Biol        ISSN: 1369-5266            Impact factor:   7.834


  67 in total

1.  The molecular basis of host specialization in bean pathovars of Pseudomonas syringae.

Authors:  David A Baltrus; Marc T Nishimura; Kevin M Dougherty; Surojit Biswas; M Shahid Mukhtar; Joana Vicente; Eric B Holub; Jeffery L Dangl
Journal:  Mol Plant Microbe Interact       Date:  2012-07       Impact factor: 4.171

Review 2.  Evolution of the type III secretion system and its effectors in plant-microbe interactions.

Authors:  Honour C McCann; David S Guttman
Journal:  New Phytol       Date:  2008       Impact factor: 10.151

3.  Natural variation in the Pto disease resistance gene within species of wild tomato (Lycopersicon). II. Population genetics of Pto.

Authors:  Laura E Rose; Richard W Michelmore; Charles H Langley
Journal:  Genetics       Date:  2006-12-18       Impact factor: 4.562

Review 4.  Clusters of resistance genes in plants evolve by divergent selection and a birth-and-death process.

Authors:  R W Michelmore; B C Meyers
Journal:  Genome Res       Date:  1998-11       Impact factor: 9.043

5.  Quantitative fitness effects of infection in a gene-for-gene system.

Authors:  Liping Gao; Fabrice Roux; Joy Bergelson
Journal:  New Phytol       Date:  2009-07-29       Impact factor: 10.151

6.  In planta conditions induce genomic changes in Pseudomonas syringae pv. phaseolicola.

Authors:  Helen C Lovell; Robert W Jackson; John W Mansfield; Scott A C Godfrey; John T Hancock; Radhika Desikan; Dawn L Arnold
Journal:  Mol Plant Pathol       Date:  2010-08-26       Impact factor: 5.663

7.  Balancing selection at the tomato RCR3 Guardee gene family maintains variation in strength of pathogen defense.

Authors:  Anja C Hörger; Muhammad Ilyas; Wolfgang Stephan; Aurélien Tellier; Renier A L van der Hoorn; Laura E Rose
Journal:  PLoS Genet       Date:  2012-07-19       Impact factor: 5.917

8.  Dynamic evolution of pathogenicity revealed by sequencing and comparative genomics of 19 Pseudomonas syringae isolates.

Authors:  David A Baltrus; Marc T Nishimura; Artur Romanchuk; Jeff H Chang; M Shahid Mukhtar; Karen Cherkis; Jeff Roach; Sarah R Grant; Corbin D Jones; Jeffery L Dangl
Journal:  PLoS Pathog       Date:  2011-07-14       Impact factor: 6.823

9.  Defining the core Arabidopsis thaliana root microbiome.

Authors:  Derek S Lundberg; Sarah L Lebeis; Sur Herrera Paredes; Scott Yourstone; Jase Gehring; Stephanie Malfatti; Julien Tremblay; Anna Engelbrektson; Victor Kunin; Tijana Glavina Del Rio; Robert C Edgar; Thilo Eickhorst; Ruth E Ley; Philip Hugenholtz; Susannah Green Tringe; Jeffery L Dangl
Journal:  Nature       Date:  2012-08-02       Impact factor: 49.962

10.  Signatures of balancing selection are maintained at disease resistance loci following mating system evolution and a population bottleneck in the genus Capsella.

Authors:  Gesseca Gos; Tanja Slotte; Stephen I Wright
Journal:  BMC Evol Biol       Date:  2012-08-21       Impact factor: 3.260

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  30 in total

1.  The Impact of Recombination Hotspots on Genome Evolution of a Fungal Plant Pathogen.

Authors:  Daniel Croll; Mark H Lendenmann; Ethan Stewart; Bruce A McDonald
Journal:  Genetics       Date:  2015-09-21       Impact factor: 4.562

Review 2.  Mechanisms to Mitigate the Trade-Off between Growth and Defense.

Authors:  Talia L Karasov; Eunyoung Chae; Jacob J Herman; Joy Bergelson
Journal:  Plant Cell       Date:  2017-03-20       Impact factor: 11.277

Review 3.  Host-parasite co-evolution and its genomic signature.

Authors:  Dieter Ebert; Peter D Fields
Journal:  Nat Rev Genet       Date:  2020-08-28       Impact factor: 53.242

4.  Genomics of sorghum local adaptation to a parasitic plant.

Authors:  Emily S Bellis; Elizabeth A Kelly; Claire M Lorts; Huirong Gao; Victoria L DeLeo; Germinal Rouhan; Andrew Budden; Govinal B Bhaskara; Zhenbin Hu; Robert Muscarella; Michael P Timko; Baloua Nebie; Steven M Runo; N Doane Chilcoat; Thomas E Juenger; Geoffrey P Morris; Claude W dePamphilis; Jesse R Lasky
Journal:  Proc Natl Acad Sci U S A       Date:  2020-02-11       Impact factor: 11.205

5.  Allelic diversity in the transcriptomes of contrasting rust-infected genotypes of Lathyrus sativus, a lasting resource for smart breeding.

Authors:  Nuno Felipe Almeida; Susana Trindade Leitão; Nicolas Krezdorn; Björn Rotter; Peter Winter; Diego Rubiales; Maria Carlota Vaz Patto
Journal:  BMC Plant Biol       Date:  2014-12-19       Impact factor: 4.215

6.  Host-Pathogen Coevolution: The Selective Advantage of Bacillus thuringiensis Virulence and Its Cry Toxin Genes.

Authors:  Leila Masri; Antoine Branca; Anna E Sheppard; Andrei Papkou; David Laehnemann; Patrick S Guenther; Swantje Prahl; Manja Saebelfeld; Jacqueline Hollensteiner; Heiko Liesegang; Elzbieta Brzuszkiewicz; Rolf Daniel; Nicolaas K Michiels; Rebecca D Schulte; Joachim Kurtz; Philip Rosenstiel; Arndt Telschow; Erich Bornberg-Bauer; Hinrich Schulenburg
Journal:  PLoS Biol       Date:  2015-06-04       Impact factor: 8.029

7.  Candidate Resistant Genes of Sand Pear (Pyrus pyrifolia Nakai) to Alternaria alternata Revealed by Transcriptome Sequencing.

Authors:  Xiaoping Yang; Hongju Hu; Dazhao Yu; Zhonghai Sun; Xiujuan He; Jingguo Zhang; Qiliang Chen; Rui Tian; Jing Fan
Journal:  PLoS One       Date:  2015-08-20       Impact factor: 3.240

8.  Evolution of multiple postzygotic barriers between species of the Mimulus tilingii complex.

Authors:  Gabrielle D Sandstedt; Carrie A Wu; Andrea L Sweigart
Journal:  Evolution       Date:  2020-10-26       Impact factor: 3.694

9.  Genome-Wide Architecture of Disease Resistance Genes in Lettuce.

Authors:  Marilena Christopoulou; Sebastian Reyes-Chin Wo; Alex Kozik; Leah K McHale; Maria-Jose Truco; Tadeusz Wroblewski; Richard W Michelmore
Journal:  G3 (Bethesda)       Date:  2015-10-08       Impact factor: 3.154

10.  Divergent sorting of a balanced ancestral polymorphism underlies the establishment of gene-flow barriers in Capsella.

Authors:  Adrien Sicard; Christian Kappel; Emily B Josephs; Young Wha Lee; Cindy Marona; John R Stinchcombe; Stephen I Wright; Michael Lenhard
Journal:  Nat Commun       Date:  2015-08-13       Impact factor: 14.919

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