| Literature DB >> 24489939 |
Xin Yang1, Jing-Wen Hu2, Man-Tang Qiu2, Ming Li2, Rong Yin2, Jie Wang3, Lin Xu2, Qin Zhang2.
Abstract
BACKGROUND ANDEntities:
Mesh:
Substances:
Year: 2014 PMID: 24489939 PMCID: PMC3906197 DOI: 10.1371/journal.pone.0087562
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1PRISMA Flow Chart.
Characteristics of Eligible Studies.
| First author | Year | Ethnicity | Cancer types | Control | Genotyping method | Cases | Controls | HWE | ||||
| 5A/5A | 5A/6A | 6A/6A | 5A/5A | 5A/6A | 6A/6A | |||||||
|
| 2000 | Caucasian | Breast cancer | PB | AS-PCR | 15 | 22 | 6 | 42 | 74 | 48 | 0.22 |
|
| 2000 | Caucasian | Colorectal cancer | PB | AS-PCR | 11 | 35 | 17 | 42 | 74 | 48 | 0.22 |
|
| 2000 | Caucasian | Ovarian cancer | PB | AS-PCR | 3 | 19 | 3 | 42 | 74 | 48 | 0.22 |
|
| 2000 | Caucasian | Lung cancer | PB | AS-PCR | 9 | 14 | 6 | 42 | 74 | 48 | 0.22 |
|
| 2002 | Caucasian | Breast cancer | Mixed | AS-PCR | 58 | 127 | 61 | 47 | 92 | 43 | 0.88 |
|
| 2002 | Caucasian | Breast cancer | PB | AS-PCR | 24 | 47 | 15 | 22 | 54 | 34 | 0.95 |
|
| 2002 | Asian | Colorectal cancer | HB | PCR-RFLP | 3 | 19 | 79 | 3 | 44 | 80 | 0.28 |
|
| 2003 | Caucasian | Ovarian cancer | PB | AS-PCR | 37 | 46 | 35 | 26 | 52 | 32 | 0.59 |
|
| 2004 | Asian | Renal cell carcinoma | HB | PCR-RFLP | 3 | 38 | 115 | 4 | 67 | 159 | 0.31 |
|
| 2004 | Asian | Head and neck cancer | HB | PCR-RFLP | 3 | 30 | 107 | 5 | 63 | 155 | 0.63 |
|
| 2004 | Caucasian | Head and neck cancer | HB | AS-PCR | 36 | 70 | 19 | 60 | 121 | 68 | 0.67 |
|
| 2004 | Caucasian | Breast cancer | PB | Taqman | 103 | 259 | 138 | 115 | 233 | 145 | 0.26 |
|
| 2004 | Asian | Esophageal cancer | HB | PCR-RFLP | 1 | 73 | 160 | 8 | 105 | 237 | 0.36 |
|
| 2004 | Asian | Gastric cancer | HB | PCR-RFLP | 5 | 42 | 136 | 8 | 105 | 237 | 0.36 |
|
| 2005 | Asian | Hepatocellular carcinoma | HB | PCR-RFLP | NA | NA | 60 | NA | NA | 137 | NA |
|
| 2005 | Asian | Lung cancer | HB | PCR-RFLP | 7 | 73 | 163 | 8 | 105 | 237 | 0.36 |
|
| 2005 | Asian | Ovarian cancer | PB | PCR-RFLP | 4 | 53 | 94 | 4 | 34 | 84 | 0.81 |
|
| 2006 | Caucasian | Bladder cancer | HB | Taqman | 134 | 285 | 136 | 136 | 277 | 143 | 0.94 |
|
| 2006 | Caucasian | Colorectal cancer | PB | PCR-RFLP | 37 | 52 | 38 | 48 | 115 | 45 | 0.13 |
|
| 2006 | Caucasian | Lung cancer | FASB | Taqman | 485 | 1012 | 517 | 325 | 648 | 350 | 0.47 |
|
| 2006 | Asian | Oral cancer | HB | AS-PCR | 0 | 31 | 119 | 1 | 12 | 85 | 0.45 |
|
| 2006 | Caucasian | Colorectal cancer | HB | AS-PCR | 158 | 271 | 166 | 130 | 291 | 126 | 0.13 |
|
| 2006 | Asian | Ovarian cancer | HB | PCR-RFLP | 4 | 34 | 84 | 4 | 53 | 94 | 0.28 |
|
| 2006 | Asian | Colorectal cancer | HB | PCR-RFLP | 1 | 23 | 102 | 1 | 27 | 98 | 0.56 |
|
| 2007 | Asian | Brain astrocytoma | HB | PCR-RFLP | 5 | 71 | 145 | 8 | 109 | 249 | 0.32 |
|
| 2007 | Caucasian | Oral cancer | PB | PCR-RFLP | 36 | 40 | 84 | 30 | 51 | 75 | <0.01 |
|
| 2007 | Asian | Colorectal cancer | PB | PCR-RFLP | 5 | 52 | 128 | 4 | 69 | 231 | 0.65 |
|
| 2007 | Asian | Nasopharyngeal carcinoma | PB | AS-PCR | 8 | 149 | 635 | 5 | 154 | 604 | 0.15 |
|
| 2007 | Caucasian | Breast cancer | PB | Taqman | 203 | 478 | 273 | 206 | 478 | 262 | 0.66 |
|
| 2007 | Asian | Hepatocellular carcinoma | HB | AS-PCR | 8 | 64 | 360 | 3 | 77 | 399 | 0.73 |
|
| 2007 | Asian | Oral cancer | HB | Taqman | 3 | 50 | 117 | 8 | 54 | 102 | 0.81 |
|
| 2008 | Asian | Cervical cancer | HB | AS-PCR | 1 | 16 | 43 | 3 | 35 | 62 | 0.46 |
|
| 2009 | Caucasian | Oral cancer | PB | PCR-RFLP | 36 | 84 | 40 | 30 | 75 | 51 | 0.80 |
|
| 2010 | Asian | Hepatocellular carcinoma | HB | PCR-RFLP | 3 | 29 | 60 | 4 | 27 | 55 | 0.77 |
|
| 2010 | Asian | Endometrial cancer | HB | PCR-RFLP | 4 | 35 | 79 | 6 | 51 | 172 | 0.35 |
|
| 2010 | Asian | Head and neck cancer | HB | PCR-RFLP | 6 | 23 | 106 | 2 | 14 | 110 | 0.07 |
|
| 2012 | Asian | Lung cancer | PB | PCR-RFLP | 26 | 15 | 0 | 20 | 24 | 7 | 0.96 |
|
| 2012 | Caucasian | Lung cancer | HB | PCR-RFLP | 164 | 367 | 185 | 119 | 276 | 139 | 0.42 |
|
| 2012 | Asian | Gastric cancer | HB | PCR-RFLP | 16 | 70 | 132 | 7 | 38 | 130 | 0.06 |
|
| 2012 | Asian | Colorectal cancer | HB | PCR-RFLP | 54 | 55 | 11 | 24 | 50 | 26 | 1.00 |
|
| 2013 | Caucasian | Lung cancer | HB | PCR-RFLP | 16 | 19 | 18 | 9 | 36 | 9 | 0.01 |
PB: population-based; HB: hospital-based; FASB: friends and spouse-based; HWE: Hardy–Weinberg equilibrium.
Meta-analysis Results.
| 6A/6A vs. 5A/5A | 6A/5A vs. 5A/5A | 6A/6A+6A/5A vs. 5A/5A | 6A/6A vs. 6A/5A+5A/5A | ||||||||
| N | OR | I2 | OR | I2 | OR | I2 | OR | I2 | |||
|
| 41 | 0.92(0.84, 1.01) | 23.7% | 0.95(0.87, 1.03) | 14.4% | 0.94(0.87, 1.01) | 14.2% | 0.94(0.85, 1.04) | 56.2% | ||
|
| |||||||||||
|
| 9 | 0.86(0.68, 1.09) | 57.3% |
| 1.9% |
| 29.0% | 0.99(0.70, 1.38) | 77.9% | ||
|
| 6 | 0.86(0.53, 1.39) | 0.0% | 1.00(0.64, 1.55) | 26.2% | 0.93(0.61, 1.42) | 0.0% | 0.92(0.66, 1.29) | 46.4% | ||
|
| 5 | 0.98(0.81, 1.18) | 55.3% | 1.06(0.90, 1.25) | 0.0% | 1.03(0.88, 1.20) | 9.8% | 0.87(0.66, 1.13) | 54.1% | ||
|
| 3 |
| 0.0% | 0.91(0.57, 1.44) | 0.0% | 0.75(0.49, 1.16) | 0.0% | 0.73(0.35, 1.52) | 80.3% | ||
|
| 3 | 0.61(0.24, 1.60) | 49.2% | 0.58(0.22, 1.55) | 51.0% | 0.61(0.24, 1.58) | 50.3% | 0.80(0.48, 1.32) | 66.8% | ||
|
| 6 | 0.95(0.81, 1.11) | 0.0% | 0.97(0.84, 1.12) | 44.1% | 0.96(0.84, 1.09) | 39.4% | 0.99(0.80, 1.22) | 39.8% | ||
|
| 4 | 0.94(0.63, 1.40) | 40.1% | 0.93(0.62, 1.38) | 35.8% | 0.94(0.65, 1.35) | 25.9% | 0.94(0.64, 1.38) | 55.1% | ||
|
| 5 | 0.99(0.74, 1.34) | 0.0% | 1.05(0.81, 1.37) | 0.0% | 1.03(0.80, 1.32) | 0.0% | 1.01(0.88, 1.16) | 0.0% | ||
|
| |||||||||||
|
| 18 | 0.96(0.87, 1.06) | 4.3% | 0.97(0.89, 1.06) | 33.7% | 0.97(0.89, 1.05) | 1.8% | 0.95(0.83,1.09) | 49.3% | ||
|
| 23 |
| 26.7% |
| 0.0% |
| 0.5% | 0.93(0.79, 1.09) | 61.8% | ||
|
| |||||||||||
|
| 7 | 0.95(0.75, 1.19) | 0.0% | 0.93(0.76, 1.15) | 51.1% | 0.94(0.77, 1.14) | 0.0% | 1.51(0.78, 2.92) | 90.7% | ||
|
| 6 | 1.01(0.84, 1.21) | 0.0% | 1.01(0.86, 1.19) | 11.4% | 1.01(0.87, 1.18) | 0.0% |
| 72.7% | ||
|
| |||||||||||
|
| 23 |
| 18.9% |
| 0.0% |
| 0.0% | 0.94(0.80, 1.12) | 64.4% | ||
|
| 13 | 0.83(0.68, 1.02) | 31.6% | 0.89(0.75, 1.06) | 23.5% | 0.88(0.74, 1.03) | 7.4% | 0.86(0.69, 1.07) | 55.0% | ||
|
| 5 | 1.03(0.90, 1.17) | 0.0% | 1.07(0.95, 1.20) | 0.0% | 1.05(0.94, 1.17) | 0.0% | 0.99(0.89, 1.09) | 0.0% | ||
|
| |||||||||||
|
| 15 | 0.90(0.77, 1.05) | 18.8% | 0.96(0.83, 1.10) | 30.4% | 0.93(0.82, 1.07) | 24.5% | 0.88(0.74, 1.04) | 44.1% | ||
|
| 24 | 0.88(0.76, 1.03) | 32.3% | 0.87(0.76, 1.00) | 0.3% |
| 7.2% | 0.97(0.83, 1.13) | 64.8% | ||
|
| 1 | 0.99(0.81, 1.20) | NA | 1.05(0.88, 1.24) | NA | 1.03(0.87, 1.21) | NA | 0.96(0.82, 1.12) | NA | ||
|
| 1 | 1.15(0.66, 1.99) | NA | 1.12(0.70, 1.79) | NA | 1.13(0.72, 1.76) | NA | 1.07(0.68, 1.67) | NA | ||
|
| |||||||||||
|
| 7 | 1.01(0.90, 1.13) | 0.0% | 1.00(0.91, 1.11) | 4.5% | 1.10(0.92, 1.11) | 0.0% | 1.01(0.93, 1.10) | 0.0% | ||
|
| 34 |
| 24.3% |
| 7.8% |
| 6.9% | 0.90(0.77, 1.04) | 61.0% | ||
GIC: Gastrointestinal cancer; GC: Gynecological cancer; BC: Breast cancer; HNC: Head and neck cancer; HC: Hepatocellular carcinoma; LC: Lung cancer; OC: Oral cancer; PB: population-based; HB: hospital-based; FASB: friends and spouse-based ; N: number of studies included; OR: odds ratio;
OR with statistical significance; a: studies with more than 1000 participants; b: studies with less than 1000 participants.
Figure 2Forest plot of dominant model for overall comparison by cancer types (6A/6A+6A/5A vs. 5A/5A).
Figure 3Forest plot of dominant model for overall comparison by ethnicities (6A/6A+6A/5A vs. 5A/5A).
Figure 4Funnel plot analysis to detect publication bias in 41 eligible studies.