Literature DB >> 24486963

Nuclear architecture as an epigenetic regulator of neural development and function.

J M Alexander1, S Lomvardas2.   

Abstract

The nervous system of higher organisms is characterized by an enormous diversity of cell types that function in concert to carry out a myriad of neuronal functions. Differences in connectivity, and subsequent physiology of the connected neurons, are a result of differences in transcriptional programs. The extraordinary complexity of the nervous system requires an equally complex regulatory system. It is well established that transcription factor combinations and the organization of cis-regulatory sequences control commitment to differentiation programs and preserve a nuclear plasticity required for neuronal functions. However, an additional level of regulation is provided by epigenetic controls. Among various epigenetic processes, nuclear organization and the control of genome architecture emerge as an efficient and powerful form of gene regulation that meets the unique needs of the post-mitotic neuron. Here, we present an outline of how nuclear architecture affects transcription and provide examples from the recent literature where these principles are used by the nervous system.
Copyright © 2013 IBRO. Published by Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  DNA methylation; chromocenters; epigenetics; histone methylation; nuclear architecture; nuclear envelope

Mesh:

Substances:

Year:  2014        PMID: 24486963      PMCID: PMC4006947          DOI: 10.1016/j.neuroscience.2014.01.044

Source DB:  PubMed          Journal:  Neuroscience        ISSN: 0306-4522            Impact factor:   3.590


  110 in total

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Review 4.  Mechanisms of odorant receptor gene choice in Drosophila and vertebrates.

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Journal:  Mol Cell Neurosci       Date:  2009-03-19       Impact factor: 4.314

5.  Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions.

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Journal:  Nature       Date:  2008-05-07       Impact factor: 49.962

6.  Allele-specific nuclear positioning of the monoallelically expressed astrocyte marker GFAP.

Authors:  Takumi Takizawa; Prabhakar R Gudla; Liying Guo; Stephan Lockett; Tom Misteli
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7.  Association between active genes occurs at nuclear speckles and is modulated by chromatin environment.

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8.  A genetic locus targeted to the nuclear periphery in living cells maintains its transcriptional competence.

Authors:  R Ileng Kumaran; David L Spector
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9.  Large histone H3 lysine 9 dimethylated chromatin blocks distinguish differentiated from embryonic stem cells.

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3.  Soft X-Ray Tomography Reveals Gradual Chromatin Compaction and Reorganization during Neurogenesis In Vivo.

Authors:  Mark A Le Gros; E Josephine Clowney; Angeliki Magklara; Angela Yen; Eirene Markenscoff-Papadimitriou; Bradley Colquitt; Markko Myllys; Manolis Kellis; Stavros Lomvardas; Carolyn A Larabell
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Review 4.  Living Organisms Author Their Read-Write Genomes in Evolution.

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6.  Super-resolution structure of DNA significantly differs in buccal cells of controls and Alzheimer's patients.

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7.  Parallel Development of Chromatin Patterns, Neuron Morphology, and Connections: Potential for Disruption in Autism.

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8.  Cross-Study Comparison Reveals Common Genomic, Network, and Functional Signatures of Desiccation Resistance in Drosophila melanogaster.

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Review 10.  Into the Fourth Dimension: Dysregulation of Genome Architecture in Aging and Alzheimer's Disease.

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