Literature DB >> 2448475

The tRNA-tufB operon transcription termination and processing upstream from tufB.

J H Van Delft1, D S Schmidt, L Bosch.   

Abstract

Two genes, tufA and tufB, located at 73 and 88 minutes of the Escherichia coli linkage map, code for the polypeptide chain elongation factor EF-Tu. tufB is transcribed with four upstream tRNA genes, thrU, tyrU, glyT and thrT, into a cotranscript of approximately 1800 nucleotides. Here we show that in vivo processing yields a 1320 nucleotide transcript of tufB. S1 nuclease fine mapping reveals that the processing site is located in the intergenic region at about 72 to 74 nucleotides upstream from the initiation codon of the tufB cistron. A deletion in the cloned tRNA-tufB operon, encompassing the 3' half of thrU, the complete tyrU, glyT, thrT genes and ten nucleotides of the intergenic region, causes a threefold increase of the rate of plasmid tufB transcription, a fourfold increase of plasmid-borne tufB RNA and a twofold increase of plasmid-borne EF-TuB. We conclude that the deletion has eliminated a transcription termination site probably located after the thrT gene. Termination at this site uncouples tRNA synthesis from tufB transcription.

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Year:  1987        PMID: 2448475     DOI: 10.1016/0022-2836(87)90471-2

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  12 in total

1.  Sequestration of specific tRNA species cognate to the last sense codon of an overproduced gratuitous protein.

Authors:  J Menez; V Heurgué-Hamard; R H Buckingham
Journal:  Nucleic Acids Res       Date:  2000-12-01       Impact factor: 16.971

2.  Mutations which alter the elbow region of tRNA2Gly reduce T4 gene 60 translational bypassing efficiency.

Authors:  A J Herr; J F Atkins; R F Gesteland
Journal:  EMBO J       Date:  1999-05-17       Impact factor: 11.598

3.  Sequence and transcriptional pattern of the essential Escherichia coli secE-nusG operon.

Authors:  W L Downing; S L Sullivan; M E Gottesman; P P Dennis
Journal:  J Bacteriol       Date:  1990-03       Impact factor: 3.490

4.  Suppression of a -1 frameshift mutation by a recessive tRNA suppressor which causes doublet decoding.

Authors:  D J O'Mahony; D Hughes; S Thompson; J F Atkins
Journal:  J Bacteriol       Date:  1989-07       Impact factor: 3.490

5.  Darkness and antibiotics increase the steady-state transcripts of the elongation factor gene (tuf) in Chlamydomonas reinhardtii.

Authors:  G W Silk; M Wu
Journal:  Curr Genet       Date:  1988-08       Impact factor: 3.886

6.  Growth phase-dependent transcription of the Streptomyces ramocissimus tuf1 gene occurs from two promoters.

Authors:  L N Tieleman; G P van Wezel; M J Bibb; B Kraal
Journal:  J Bacteriol       Date:  1997-06       Impact factor: 3.490

7.  The elongation factor EF-Tu from E. coli binds to the upstream activator region of the tRNA-tufB operon.

Authors:  E Vijgenboom; L Nilsson; L Bosch
Journal:  Nucleic Acids Res       Date:  1988-11-11       Impact factor: 16.971

8.  Genetic characterization of frameshift suppressors with new decoding properties.

Authors:  D Hughes; S Thompson; M O'Connor; T Tuohy; B P Nichols; J F Atkins
Journal:  J Bacteriol       Date:  1989-02       Impact factor: 3.490

9.  Gratuitous overexpression of genes in Escherichia coli leads to growth inhibition and ribosome destruction.

Authors:  H Dong; L Nilsson; C G Kurland
Journal:  J Bacteriol       Date:  1995-03       Impact factor: 3.490

10.  Gene organization and sequence analyses of transfer RNA genes in Trypanosomatid parasites.

Authors:  Norma E Padilla-Mejía; Luis E Florencio-Martínez; Elisa E Figueroa-Angulo; Rebeca G Manning-Cela; Rosaura Hernández-Rivas; Peter J Myler; Santiago Martínez-Calvillo
Journal:  BMC Genomics       Date:  2009-05-18       Impact factor: 3.969

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