| Literature DB >> 24481629 |
Yu Yin1, Na Liu, Xiaoying Ye, Renpeng Guo, Jie Hao, Fang Wang, Lin Liu.
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Year: 2014 PMID: 24481629 PMCID: PMC3938844 DOI: 10.1007/s13238-013-0006-z
Source DB: PubMed Journal: Protein Cell ISSN: 1674-800X Impact factor: 14.870
Figure 1Telomere length and genome-wide gene expression of pES cells versus ES (fES) cells. (A) Colony morphology of pES cells (1116, C3) and fES cells (BF10) at passages 13–15. (B) Relative telomere length expressed as T/S ratio measured by quantitative real-time PCR method. Error bars indicate mean ± SD (at least two repeats). *, P < 0.05; **, P < 0.01, compared to fES cells. (C) Telomere quantitative FISH images of chromosome spread from pES and fES cells. Green dots, telomeres; blue, DAPI-stained chromosomes. (D) Distribution histogram showing relative telomere length (TFU) of pES cells and fES cells, analyzed by telomere Q-FISH and TFL-TELO software (10–15 spreads analyzed for each cell line). (E) Longer telomere length expressed as T/S ratio estimated by qPCR in pES (Y5 and Y6) derived from oocytes of C57BL/6 mice, compared with fES (N33) from the same genetic background. *, P < 0.05, compared to the corresponding pES at P12. (F) Scatter plot showing comparison of global gene expression of pES cells and fES cells. Genes up-regulated (highlighted in red) and down-regulated (in green) in pES cells (C3 and 1116) were compared with those of fES cells. Genes are listed in Tables S1 and S2 using cut off as fold ≥ 2.0. (G) Real-time PCR validation of selected 20 genes differentially expressed between pES and fES cells by microarray
Figure 2Involvement of Zscan4 in telomere elongation of pES cells. (A) Immunofluorescence images of Zscan4 (red) and Oct4 (green) in pES (1116 and C3) versus fES cells (BF10) at passage 15–16. Nuclei stained with Hoechst 33342 (blue). (B) Analysis of Zscan4+ cells in pES or fES cell cultures at passage 15–16 by flow cytometry. Two repeats. (C) Proportion of Zscan4+ cells in pES cell cultures (1116 and C3) compared with fES cell cultures (BF10) by flow cytometry and immunofluorescence microscopy. (D) Protein levels of Zscan4 in fES cells (BF10) and pES cells (1116 and C3) at passage 15–16 by Western blot. β-Actin served as loading control. (E) Zscan4 expression levels by qPCR are notably lower in Zscan4 stable knockdown (KD) pES cells (C3 or 1116) by two shRNAs (T1, T2), compared with knockdown controls. (F) Telomeres of Zscan4 knockdown (Zscan4-T1 and Zscan4-T2) pES cells (C3 or 1116) are shorter than those of control knockdown pES cells (Zscan4-Con) at passage 20 analyzed by qPCR. Error bars indicate mean ± SD. *, P < 0.05; **, P < 0.01; ***, P < 0.001, compared with control knockdown. (G) Distribution histogram showing relative telomere length as TFU in Zscan4 knockdown (Zscan4-T1 and Zscan4-T2) pES cells (C3) and in control knockdown cells (Zscan4-Con) at passage 20, analyzed by telomere Q-FISH and the TFL-TELO software. Medium telomere lengths are indicated by green bar