Literature DB >> 24481254

PROTEIN DISULFIDE ISOMERASE LIKE 5-1 is a susceptibility factor to plant viruses.

Ping Yang1, Thomas Lüpken, Antje Habekuss, Goetz Hensel, Burkhard Steuernagel, Benjamin Kilian, Ruvini Ariyadasa, Axel Himmelbach, Jochen Kumlehn, Uwe Scholz, Frank Ordon, Nils Stein.   

Abstract

Protein disulfide isomerases (PDIs) catalyze the correct folding of proteins and prevent the aggregation of unfolded or partially folded precursors. Whereas suppression of members of the PDI gene family can delay replication of several human and animal viruses (e.g., HIV), their role in interactions with plant viruses is largely unknown. Here, using a positional cloning strategy we identified variants of PROTEIN DISULFIDE ISOMERASE LIKE 5-1 (HvPDIL5-1) as the cause of naturally occurring resistance to multiple strains of Bymoviruses. The role of wild-type HvPDIL5-1 in conferring susceptibility was confirmed by targeting induced local lesions in genomes for induced mutant alleles, transgene-induced complementation, and allelism tests using different natural resistance alleles. The geographical distribution of natural genetic variants of HvPDIL5-1 revealed the origin of resistance conferring alleles in domesticated barley in Eastern Asia. Higher sequence diversity was correlated with areas with increased pathogen diversity suggesting adaptive selection for bymovirus resistance. HvPDIL5-1 homologs are highly conserved across species of the plant and animal kingdoms implying that orthologs of HvPDIL5-1 or other closely related members of the PDI gene family may be potential susceptibility factors to viruses in other eukaryotic species.

Entities:  

Keywords:  allele mining; chaperone; resistance breeding; soil-borne virus disease

Mesh:

Substances:

Year:  2014        PMID: 24481254      PMCID: PMC3926060          DOI: 10.1073/pnas.1320362111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  52 in total

1.  The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling.

Authors:  Konstantin Arnold; Lorenza Bordoli; Jürgen Kopp; Torsten Schwede
Journal:  Bioinformatics       Date:  2005-11-13       Impact factor: 6.937

Review 2.  Genetics of plant virus resistance.

Authors:  Byoung-Cheorl Kang; Inhwa Yeam; Molly M Jahn
Journal:  Annu Rev Phytopathol       Date:  2005       Impact factor: 13.078

Review 3.  Translation initiation factors: a weak link in plant RNA virus infection.

Authors:  Christophe Robaglia; Carole Caranta
Journal:  Trends Plant Sci       Date:  2005-12-15       Impact factor: 18.313

4.  Phylogenetic analyses identify 10 classes of the protein disulfide isomerase family in plants, including single-domain protein disulfide isomerase-related proteins.

Authors:  Norma L Houston; Chuanzhu Fan; Jenny Qiu-Yun Xiang; Jan-Michael Schulze; Rudolf Jung; Rebecca S Boston
Journal:  Plant Physiol       Date:  2005-01-28       Impact factor: 8.340

5.  Downregulation of protein disulfide isomerase inhibits infection by the mouse polyomavirus.

Authors:  Joanna Gilbert; Wu Ou; Jonathan Silver; Thomas Benjamin
Journal:  J Virol       Date:  2006-08-23       Impact factor: 5.103

6.  Genomics-based high-resolution mapping of the BaMMV/BaYMV resistance gene rym11 in barley (Hordeum vulgare L.).

Authors:  Thomas Lüpken; Nils Stein; Dragan Perovic; Antje Habekuss; Ilona Krämer; Urs Hähnel; Burkhard Steuernagel; Uwe Scholz; Rounan Zhou; Ruvini Ariyadasa; Stefan Taudien; Matthias Platzer; Mihaela Martis; Klaus Mayer; Wolfgang Friedt; Frank Ordon
Journal:  Theor Appl Genet       Date:  2013-03-02       Impact factor: 5.699

7.  A physical, genetic and functional sequence assembly of the barley genome.

Authors:  Klaus F X Mayer; Robbie Waugh; John W S Brown; Alan Schulman; Peter Langridge; Matthias Platzer; Geoffrey B Fincher; Gary J Muehlbauer; Kazuhiro Sato; Timothy J Close; Roger P Wise; Nils Stein
Journal:  Nature       Date:  2012-10-17       Impact factor: 49.962

8.  TILLING in the two-rowed barley cultivar 'Barke' reveals preferred sites of functional diversity in the gene HvHox1.

Authors:  Sven Gottwald; Petra Bauer; Takao Komatsuda; Udda Lundqvist; Nils Stein
Journal:  BMC Res Notes       Date:  2009-12-17

9.  CDD: conserved domains and protein three-dimensional structure.

Authors:  Aron Marchler-Bauer; Chanjuan Zheng; Farideh Chitsaz; Myra K Derbyshire; Lewis Y Geer; Renata C Geer; Noreen R Gonzales; Marc Gwadz; David I Hurwitz; Christopher J Lanczycki; Fu Lu; Shennan Lu; Gabriele H Marchler; James S Song; Narmada Thanki; Roxanne A Yamashita; Dachuan Zhang; Stephen H Bryant
Journal:  Nucleic Acids Res       Date:  2012-11-28       Impact factor: 16.971

10.  Agrobacterium-mediated gene transfer to cereal crop plants: current protocols for barley, wheat, triticale, and maize.

Authors:  Goetz Hensel; Christine Kastner; Sylwia Oleszczuk; Jan Riechen; Jochen Kumlehn
Journal:  Int J Plant Genomics       Date:  2009-06-21
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  29 in total

1.  Analysis of bymovirus resistance genes on proximal barley chromosome 4HL provides the basis for precision breeding for BaMMV/BaYMV resistance.

Authors:  Ping Yang; Antje Habekuß; Frank Ordon; Nils Stein
Journal:  Theor Appl Genet       Date:  2014-05-22       Impact factor: 5.699

2.  High-Resolution Mapping of Barley mild mosaic virus Resistance Gene rym15.

Authors:  Yaping Wang; Antje Habekuß; Murukarthick Jayakodi; Martin Mascher; Rod J Snowdon; Andreas Stahl; Janina Fuß; Frank Ordon; Dragan Perovic
Journal:  Front Plant Sci       Date:  2022-06-02       Impact factor: 6.627

Review 3.  Exploring New Routes for Genetic Resistances to Potyviruses: The Case of the Arabidopsis thaliana Phosphoglycerates Kinases (PGK) Metabolic Enzymes.

Authors:  Mamoudou Diop; Jean-Luc Gallois
Journal:  Viruses       Date:  2022-06-08       Impact factor: 5.818

4.  Site-Directed Mutagenesis in Barley Using RNA-Guided Cas Endonucleases During Microspore-Derived Generation of Doubled Haploids.

Authors:  Robert Eric Hoffie; Ingrid Otto; Hiroshi Hisano; Jochen Kumlehn
Journal:  Methods Mol Biol       Date:  2021

5.  Resistance to wheat yellow mosaic virus in Madsen wheat is controlled by two major complementary QTLs.

Authors:  Takako Suzuki; Miyuki-Nitta Murai; Takeshi Hayashi; Shuhei Nasuda; Yasuhiro Yoshimura; Takao Komatsuda
Journal:  Theor Appl Genet       Date:  2015-05-10       Impact factor: 5.699

6.  Bulked segregant RNA-sequencing (BSR-seq) identified a novel rare allele of eIF4E effective against multiple isolates of BaYMV/BaMMV.

Authors:  Lijie Shi; Congcong Jiang; Qiang He; Antje Habekuß; Frank Ordon; Haiye Luan; Huiquan Shen; Jun Liu; Zongyun Feng; Jing Zhang; Ping Yang
Journal:  Theor Appl Genet       Date:  2019-02-27       Impact factor: 5.699

7.  A chromosome conformation capture ordered sequence of the barley genome.

Authors:  Martin Mascher; Heidrun Gundlach; Axel Himmelbach; Sebastian Beier; Sven O Twardziok; Thomas Wicker; Volodymyr Radchuk; Christoph Dockter; Pete E Hedley; Joanne Russell; Micha Bayer; Luke Ramsay; Hui Liu; Georg Haberer; Xiao-Qi Zhang; Qisen Zhang; Roberto A Barrero; Lin Li; Stefan Taudien; Marco Groth; Marius Felder; Alex Hastie; Hana Šimková; Helena Staňková; Jan Vrána; Saki Chan; María Muñoz-Amatriaín; Rachid Ounit; Steve Wanamaker; Daniel Bolser; Christian Colmsee; Thomas Schmutzer; Lala Aliyeva-Schnorr; Stefano Grasso; Jaakko Tanskanen; Anna Chailyan; Dharanya Sampath; Darren Heavens; Leah Clissold; Sujie Cao; Brett Chapman; Fei Dai; Yong Han; Hua Li; Xuan Li; Chongyun Lin; John K McCooke; Cong Tan; Penghao Wang; Songbo Wang; Shuya Yin; Gaofeng Zhou; Jesse A Poland; Matthew I Bellgard; Ljudmilla Borisjuk; Andreas Houben; Jaroslav Doležel; Sarah Ayling; Stefano Lonardi; Paul Kersey; Peter Langridge; Gary J Muehlbauer; Matthew D Clark; Mario Caccamo; Alan H Schulman; Klaus F X Mayer; Matthias Platzer; Timothy J Close; Uwe Scholz; Mats Hansson; Guoping Zhang; Ilka Braumann; Manuel Spannagl; Chengdao Li; Robbie Waugh; Nils Stein
Journal:  Nature       Date:  2017-04-26       Impact factor: 49.962

Review 8.  Recessive Resistance to Plant Viruses: Potential Resistance Genes Beyond Translation Initiation Factors.

Authors:  Masayoshi Hashimoto; Yutaro Neriya; Yasuyuki Yamaji; Shigetou Namba
Journal:  Front Microbiol       Date:  2016-10-26       Impact factor: 5.640

Review 9.  Crop immunity against viruses: outcomes and future challenges.

Authors:  Valérie Nicaise
Journal:  Front Plant Sci       Date:  2014-11-21       Impact factor: 5.753

10.  A disulphide isomerase gene (PDI-V) from Haynaldia villosa contributes to powdery mildew resistance in common wheat.

Authors:  Muhammad Faheem; Yingbo Li; Muhammad Arshad; Cheng Jiangyue; Zhao Jia; Zongkuan Wang; Jin Xiao; Haiyan Wang; Aizhong Cao; Liping Xing; Feifei Yu; Ruiqi Zhang; Qi Xie; Xiue Wang
Journal:  Sci Rep       Date:  2016-04-13       Impact factor: 4.379

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